| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1233 |
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| Symbol | |
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| ID | 5052156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1295712 |
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| End bp | 1296356 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471405 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001156012 |
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| Protein GI | 145589415 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.783126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATTAA AAAAAGCACT ACTTACACCT GCGCTAGGTT TATTCCTGGG CCTAGTTGTT
TCCATGCCCG CCTTCGCTTC TGATGCTGCG GATGCAGCTG CCGAGACGGT TGTTCCTAAA
GAAAGCATGT TCCAGGCAGG GCGCGCTTAC ATTGCCCGAG TTTCCGATCG TTTGGCTGAT
ACCGTTTCCG GAAAATCAGA AGAATTAATA AATCGCGCCA TGGTAGTGAT TGGTGTGCGT
TATCGCTGGG ATGCTGAATT GCCACAGTCT GGTTTGGATG GCAGCAGTTT CGTTGGCTAT
GTCTTTAAAG ATAAATTGGG TTTCTTGTTG CCACGTAAAG CAACCCAGAT GAGCCGTGTT
GGAAAGCCTA TTACTCGTGA TGAGTTGCAG CCTGGTGATC TTGTATTTTT TAATACCATG
CGCTTAACTT TTTCACATGT GGGTATCTAT GTTGGCGACA ATAAATTTAT TCACTCGCCA
TCAAAGGGTA CTAATGTGCG CGTTGATGAC TTAGGCAGCT TGTATTGGGA TAAACGTTTT
GATGGTGCGC GTCGATTAGA CGGCAGCGAC AATCTCAATG ACTCTGAACG TCAAGATTTG
TTAAACGAAG TCAACAATCT AAAACGTCAA TCTCCTAGTC TCTAG
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| Protein sequence | MSLKKALLTP ALGLFLGLVV SMPAFASDAA DAAAETVVPK ESMFQAGRAY IARVSDRLAD
TVSGKSEELI NRAMVVIGVR YRWDAELPQS GLDGSSFVGY VFKDKLGFLL PRKATQMSRV
GKPITRDELQ PGDLVFFNTM RLTFSHVGIY VGDNKFIHSP SKGTNVRVDD LGSLYWDKRF
DGARRLDGSD NLNDSERQDL LNEVNNLKRQ SPSL
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