Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1232 |
Symbol | |
ID | 5052155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1294758 |
End bp | 1295663 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640471404 |
Product | patatin |
Protein accession | YP_001156011 |
Protein GI | 145589414 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.288587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAAA TTTCATCAAA ATCTCCTCGC CCATCCATAC AGCGCCGTAA TTTAATAGGC TTAGGCATGG GTCTAGGTGC TTTAGTAGGT GCCGGCGGAT TAAGTTCTTG CAGCCTCATG GGAAGCAAAA AACCCGTAAT AGGCCTAGTC TTGGGTGCAG GAGCGGCCCG TGGCTTTGCC CATATCGGCG TTATCAAGGC TCTTGAAGCT CAAGGCATTC GCCCCGATAT CGTTGTGGGT AGTAGCGCCG GAAGCGTGAT TGCCGCCCTT CTCGCTTCAG GCCTCAATGG AAATGACATG AACCGTCTTG CCCTCAATCT CGACGAAGCG ACGATAGCGG ACTGGGGACT CCCTTTTGCA GGTCGCTTTG GGGGACTCAT TAAAGGCGAT GCCCTACAAA ATATGGTCAA TCGTGAAGTG CAAAATAAAA CGATTGAACA AATGCGCATT CCGCTAGGAG TTGTTGCCAC TGAATTGCAG TCGGGCAAAG GCGTTCTCTT TCGCACTGGC AATACCGGTT TAGCGGTACG CGCTTCGTGC AGCGTACCCG GCGTATTTCA ACCAGCAGTC ATCAATGGCA AAGAATATGT TGACGGTGGA TTAGTGGCAC CAGTGCCAGT GAGTTACGCA AGACAGATGG GTGCCACCCT AGTGATTGCA GTCAACATTT CCTCTGAACC AGTTCATCAA GATGCCAGTG GAACCTTTGG TGTATTACAG CAAACGATTT CCATCATGCA GCGAAGCATC AACCAATATG AATTAAAGAG TGCTGATATT GTGATTCAGC CGCAGCTGAG GCAGATGAGT AGCGGGGAAT TCAAGTCCAG AAATGCAGCG ATTCTTGCTG GTGAAGTAGC CACTCAGGAA CAAATGGCTT TAATTAAGGA AAAACTGAGG GGCTAA
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Protein sequence | MHKISSKSPR PSIQRRNLIG LGMGLGALVG AGGLSSCSLM GSKKPVIGLV LGAGAARGFA HIGVIKALEA QGIRPDIVVG SSAGSVIAAL LASGLNGNDM NRLALNLDEA TIADWGLPFA GRFGGLIKGD ALQNMVNREV QNKTIEQMRI PLGVVATELQ SGKGVLFRTG NTGLAVRASC SVPGVFQPAV INGKEYVDGG LVAPVPVSYA RQMGATLVIA VNISSEPVHQ DASGTFGVLQ QTISIMQRSI NQYELKSADI VIQPQLRQMS SGEFKSRNAA ILAGEVATQE QMALIKEKLR G
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