Gene Pnuc_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1232 
Symbol 
ID5052155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1294758 
End bp1295663 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID640471404 
Productpatatin 
Protein accessionYP_001156011 
Protein GI145589414 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.288587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAA TTTCATCAAA ATCTCCTCGC CCATCCATAC AGCGCCGTAA TTTAATAGGC 
TTAGGCATGG GTCTAGGTGC TTTAGTAGGT GCCGGCGGAT TAAGTTCTTG CAGCCTCATG
GGAAGCAAAA AACCCGTAAT AGGCCTAGTC TTGGGTGCAG GAGCGGCCCG TGGCTTTGCC
CATATCGGCG TTATCAAGGC TCTTGAAGCT CAAGGCATTC GCCCCGATAT CGTTGTGGGT
AGTAGCGCCG GAAGCGTGAT TGCCGCCCTT CTCGCTTCAG GCCTCAATGG AAATGACATG
AACCGTCTTG CCCTCAATCT CGACGAAGCG ACGATAGCGG ACTGGGGACT CCCTTTTGCA
GGTCGCTTTG GGGGACTCAT TAAAGGCGAT GCCCTACAAA ATATGGTCAA TCGTGAAGTG
CAAAATAAAA CGATTGAACA AATGCGCATT CCGCTAGGAG TTGTTGCCAC TGAATTGCAG
TCGGGCAAAG GCGTTCTCTT TCGCACTGGC AATACCGGTT TAGCGGTACG CGCTTCGTGC
AGCGTACCCG GCGTATTTCA ACCAGCAGTC ATCAATGGCA AAGAATATGT TGACGGTGGA
TTAGTGGCAC CAGTGCCAGT GAGTTACGCA AGACAGATGG GTGCCACCCT AGTGATTGCA
GTCAACATTT CCTCTGAACC AGTTCATCAA GATGCCAGTG GAACCTTTGG TGTATTACAG
CAAACGATTT CCATCATGCA GCGAAGCATC AACCAATATG AATTAAAGAG TGCTGATATT
GTGATTCAGC CGCAGCTGAG GCAGATGAGT AGCGGGGAAT TCAAGTCCAG AAATGCAGCG
ATTCTTGCTG GTGAAGTAGC CACTCAGGAA CAAATGGCTT TAATTAAGGA AAAACTGAGG
GGCTAA
 
Protein sequence
MHKISSKSPR PSIQRRNLIG LGMGLGALVG AGGLSSCSLM GSKKPVIGLV LGAGAARGFA 
HIGVIKALEA QGIRPDIVVG SSAGSVIAAL LASGLNGNDM NRLALNLDEA TIADWGLPFA
GRFGGLIKGD ALQNMVNREV QNKTIEQMRI PLGVVATELQ SGKGVLFRTG NTGLAVRASC
SVPGVFQPAV INGKEYVDGG LVAPVPVSYA RQMGATLVIA VNISSEPVHQ DASGTFGVLQ
QTISIMQRSI NQYELKSADI VIQPQLRQMS SGEFKSRNAA ILAGEVATQE QMALIKEKLR
G