Gene Pnuc_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1226 
SymbolrbfA 
ID5053216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1286765 
End bp1287133 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content43% 
IMG OID640471398 
Productribosome-binding factor A 
Protein accessionYP_001156005 
Protein GI145589408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.333897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA CTAGCCCTCA TCGCAACCAG CGTCTCGCCG ATCAAATTCA GCGAGACCTG 
GCCGAACTGA TTCCACGTGA ATTGCGTAGC ACAAGCTTGG GTTTAATTAC CCTGCAAAGT
ATTGAGCTTT CTCCAGACTT AGCCCATGCC AAAGTATTTT TTACGGTTTT AGGTGCTGAG
CCTGAGCATG CATTAAAAGC TTTGCAAGAA AAAGCAGGTT ATTTGCATTC ATTGTTATTC
AAGCGTTTGC ATATTCATAC TGTGCCAACA TTGCATTTTC ACTATGACAG CTCAGTAGAG
CATGGCATTG AAATGTCTCG ATTGATCGAT CAGGCTGTAG AGAGCGATCA ACAAGACGAG
AGCAAATAA
 
Protein sequence
MHKTSPHRNQ RLADQIQRDL AELIPRELRS TSLGLITLQS IELSPDLAHA KVFFTVLGAE 
PEHALKALQE KAGYLHSLLF KRLHIHTVPT LHFHYDSSVE HGIEMSRLID QAVESDQQDE
SK