| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1223 |
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| Symbol | |
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| ID | 5053222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1282728 |
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| End bp | 1283909 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471395 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001156002 |
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| Protein GI | 145589405 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAA TCCCACCAGC AGACCCTCAA AATTCGATGC CAAGATGGAT GGTATTTTTG
TTCGCTTGCG CCTGCGGCCT AATGGTTGCC AACCTCTATT ACGCCCAACC CCTTATTAGC
CTCATTGCCC TCGAAGTTGG CCTGGATGGG TCAGCTGCCA GCCTCATTGT TACCCTGACT
CAACTAGGCT ATTGCACAGG GCTAATGCTC CTAGTCCCGC TTGGAGATCT TCTCGAAAAT
CGTAAATTAG TCGTTCTTAC AATCTGTGGC GCAATCATTG CCTTATTGAT GGCCACGTTG
TCTCAAACAG CAACCTGGTT TTTAATTTCT GCATGCCTTA TTGGAATTGG CTCTGTGGCG
GTTCAAATGC TCTTACCGAT TGCCGCCAAT ATGACTCCGG AGAAAAAAAG GGGGAGCACT
ATCGGCAGCA TTATGAGCGG CTTATTGCTC GGCATTATGT TGGCTAGGCC TATAGCAAGC
CTAGTGGCTG ACTCATTTGG CTGGCGAACC GTTTTTGGTG CTTCGGCCAT ACTATTAATA
GTATTTGCAA TCATCTTGTG GATTTTATTA CCTATTCGCA AGCCCCAATC TAAGGTTAGT
TACTTTTCAC TAATTGGTTC ACTTTGGATG CTCTTAAGGG ATACACCCAT CTTACGACGT
CGCGCACTTT ATCAAGCCAG TCTATTTGCC TCCTTCACCC TATTTTGGAC AATCACCCCA
ATATTACTTT CAGCCCCACC ATTCAACCTC ACCCAACAGG GAATCGCGTT CTTTGCATTT
GCTGGTGCAG TTGGAGTGTT GGCAGCACCT ATTGCAGGAA GATTAGCTGA TCGCGGACAC
ACCAAGATCA CCACCCTATT TTCTTTGGCA ATAGGGTCTG GCGCCTTTCT CTTAGCTTTA
CTAGCGGGCA ACTCTGGGTC ACTAGCACTA CTAGTTGTAT CAGCAATATT GCTAGATTTA
GGAGTGCAAA GCAATGTCGT TTTAGGTCAG CGCACTATTT ACCTGTTGGG CGCAGAAGTA
AGAAGTCGTT TAAATGCGCT CTATATGGCC ATCTTCTTTG CGGGTGGTGC AATTGGGTCT
GGTATTGCCA GCGTCGCCTA CATATATGGT GGATGGAGTC TGGTAGCTTG GCTTGGATTT
GCATTTCCAG CGCTAGGCTT GATCTTTTTC CTTACCGAAT AA
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| Protein sequence | MNPIPPADPQ NSMPRWMVFL FACACGLMVA NLYYAQPLIS LIALEVGLDG SAASLIVTLT
QLGYCTGLML LVPLGDLLEN RKLVVLTICG AIIALLMATL SQTATWFLIS ACLIGIGSVA
VQMLLPIAAN MTPEKKRGST IGSIMSGLLL GIMLARPIAS LVADSFGWRT VFGASAILLI
VFAIILWILL PIRKPQSKVS YFSLIGSLWM LLRDTPILRR RALYQASLFA SFTLFWTITP
ILLSAPPFNL TQQGIAFFAF AGAVGVLAAP IAGRLADRGH TKITTLFSLA IGSGAFLLAL
LAGNSGSLAL LVVSAILLDL GVQSNVVLGQ RTIYLLGAEV RSRLNALYMA IFFAGGAIGS
GIASVAYIYG GWSLVAWLGF AFPALGLIFF LTE
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