| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1220 |
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| Symbol | |
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| ID | 5053911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1278531 |
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| End bp | 1279454 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471392 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001155999 |
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| Protein GI | 145589402 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.826592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCTAG AAATTACTCA CGATACTCAT TACTCTTACG ATCCTAACGT AGAGGTTGCA
CAACATTTTG CCCACCTCAA GCCGGCGTCA CAAAAATCAC AGCAGGTTTT AAAAACACGG
CTCTTGATCT ACCCCAACCC TGCCTGGAGC GATGAAAGCC TGGATGATTA TGGGAATGTG
CGCACTTTTT TCTCTCTGCA AAATAGACAT AGCGAACTTC GAATTACAGC CAAGTCATTG
ATACAGACAA ATGAAAACGT GCAGATGGGG CCCGATCCCG AAAATACCCC ACCCTGGGAG
TCTGTACGCG AATACTTTCG CTATCACTCG AATACTCAGT GGGACGCGGC TTCCGAATTT
TTATTTACCT CCCCTTTTAT TGCCCTACGT GCAGAGTTTG CCGAATTTGC GAGAGCAAAC
TTTACCAGCG GAAGGCCAAT CTTAGAGGCT GCAATAGATC TGACTCAGCG CATCTATGGT
GAATTTCACT ATGTCAGTAA GAGTACTGAT ATTGGCACAC CAGCACTTGA GGCATTAAAT
AAACGGCAAG GGGTATGCCA GGATTTTGCA CATATTTTGA TTGCCTCATT GCGTAGCATT
GGGCTTCCAG CAAAATATAT CAGTGGTTAC ATCCTCACAA ACCCACCACC CGGACAGGCG
CGCCTGATTG GCGGTGATGC ATCCCATGCG TGGGCATCTA TTTATATCCC AAGCATTAAT
GAAGATGGGC AGCTGTCAGA GGGAATGTGG TGCGACCTAG ATCCAACCAA TAATCGCTGG
GGTTATGAAA CCCCTGGTGA TGATTATGTC CATTTAGCTC AGGGAAGGGA CTATGCCGAT
GTCTCCCCTA TTCGCGGCGT GATCCATGGT GGCGCTGATC ACACATTGGA TGTCGCTGTG
ACTGTAATGC CAATTGAGCA ATAG
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| Protein sequence | MLLEITHDTH YSYDPNVEVA QHFAHLKPAS QKSQQVLKTR LLIYPNPAWS DESLDDYGNV
RTFFSLQNRH SELRITAKSL IQTNENVQMG PDPENTPPWE SVREYFRYHS NTQWDAASEF
LFTSPFIALR AEFAEFARAN FTSGRPILEA AIDLTQRIYG EFHYVSKSTD IGTPALEALN
KRQGVCQDFA HILIASLRSI GLPAKYISGY ILTNPPPGQA RLIGGDASHA WASIYIPSIN
EDGQLSEGMW CDLDPTNNRW GYETPGDDYV HLAQGRDYAD VSPIRGVIHG GADHTLDVAV
TVMPIEQ
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