| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1219 |
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| Symbol | |
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| ID | 5053476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1275906 |
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| End bp | 1278518 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471391 |
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| Product | hypothetical protein |
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| Protein accession | YP_001155998 |
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| Protein GI | 145589401 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.663605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGCAT CTCAAGCCAG CCCTTTGAAA TCTATAACCA ACCCCTCTCT TGTGGATGAG
ATCACTCGCC TAGCACCTAA GGCGAGTGAG GGGCATTTCG ACGAGTTGCG CGGGAATGGC
TCAGAGCTAT TGCCACATTG GAAAACATTT TTTGATCAAC TGGAACCTTC TGGACTCTCT
GACTTAGATC AGCGCACTTT AGAGCTTGAT CGTCAGGTCA GAGAAAACGG CATTACTTAT
AACGTCTATG CCGATGAGTT TGGCCCACAA CGCCCGTGGT CTGTGGATTT ATTTCCCCTC
ATCATTAATA CTGAGTCTTG GCAAGAAATT CAATCAGGGG TTTTGCAACG TGCTCGTTTA
TTAGAAGCCA TAGTCCAGGA TATTTACGGC CCTCAAACAC TTCTGAAAGA AGGTTATATT
CCACCTGCAT TGGTTTATGG GCATCCAGGC TACCTAAGAT CAATGCATGG CGCCAAACTC
AATAATCGCA AACATCTGCA CATCATTGCC TTTGATTTAG CTAGAGCCCC CAATGGGAAG
TGGTCTGTGC TATCGCAACG TACTCAAGCA CCATCGGGCC TTGGATACTT ATTGGAAAAC
CGTAATCTCA TTGCGCGCCA ATTTCCAGCA GCCTATGAAG CGATGCAAAT TACTCCACTG
GCAAATGCCT ACCGCGATTT AATTGATGCC CTAAAGCTTG AAAGCCCAGC AGGTTCAAAT
GCGCACATTG CCCTACTGAC TCCTGGTCCT TATAACGAAA CCTATTTTGA ACATGCCTAT
CTGGCACGCT ACTTAGGCTT AACTCTAGTT GAGGGCGGTG ATTTAACTGT CCGTGACCAG
CGCCTTTATT TAAAAACTGT ACGTGGATTA GAGCCAGTAG ATATCCTACT CAAGCGTCTA
GATGATGAAT TCTTAGACCC GCTAGAGTTA CGCTCAGATT CGACTTTGGG GGTGCCTGGC
TTGATGCAAG TCATTCGCGC AGGCAATGTC ATTCTTGCTA ACGCCCCTGG ATCAGCCTTC
TTGGAATCCC CTGCTTTGCT GGGATTTTTA CCAGCTATTA GCGAACACTT GCTTGGGGAA
GAAATTCAAT TACCAGCAAT GGATACTTGG TGGTGCGGAG AAAGAGCAGC TCTTGAAGCT
GCCATTCCCA ATCTCGGCCA CAGCGCTATT AAGCCGACCT ACCCCAACGG TAGCGGGCAC
CAGAACTATG AATCTGCCTT AGGCGGTGAA TTATCACAAG CCCAGTTAGA TCAATGGGTG
GGTCGCATTA CGCGTCAGCC AGATGAACAT ACTGTTCAAA CCTACATTCC GCTGGCACAG
ATGCCAACCT GGCTCAATGC TTTTAATTTA AATGATGCTT CTTTAATTGA ACCCCATTCA
TATATGTTGC GGGTCTTTGC CCTTAGCAAT GGTGCTGATA GCTGGCAAGT ATTACCTGGT
GGACTTGCAC GCATTGCCGG CAACAACTCT GGGGTAGCCT CCATGCAACG AGGTGGTAGT
AGCGCAGATG TTTGGGTTCA AACCCAGCAA TCCAATGCAA ATCAAGAGAA CCATACCCAG
CAAGTAGCGC CAAATAAAGA AATACTTCTG CGCAAGCGTA TGGTGACAAG TCGCGCTGCG
GAAAACTTAT ATTGGTTTGG CCGTTATACC GAGCGAAGTG AGAATATCCT GCGGCTCGCG
AAACTCTACC TTGAAAATAT TAATAGCGAA TACACTCCTT CTCGATCGCT ATGGTCCTGG
CTAGAGAATC TTTGCCATCA CTATGGTTTA GTACCTGATG GTGTTCCTAG TAACTTTGAT
CAAGGGGATA TTCGTCATCG GATATTTGAG CGCACCTTAG TGCACTCACT CAACGCGTCA
GAGAATGTCA CTAGCGTTGG CTTTAATCTC AACGCCATGA AGCGCACAGC CTCCAATGTT
CGGGAACGGC TTTCTACAGA ACAATGGAGC ACGATTAATC ATTGCATTGA TCAGTTTGAG
CAAGACTGCC ATAAAGCCAA CTCCTTTCAT GATTTTTCCT CATCGCTAGC GATTGATGCG
CTCAAGCAAG CGAGTAGCTC ACTGGCCGCT ATTACAGGGG CGCAAACCGA CCGAATGACT
CGCGATGACG GCTGGCAATT GCTTTCTATT GGTCGTCATA TTGAGCGCTT ATCGTTTCTA
ACGACAGTTT TAGATTCTGC AATCCAAGCA GGTCTATTAA ACAATCCGAA TTCTGATAGC
TCTGGCTATA CCGCTTTATT GAATCTATTC GATAGTACGA TTACCTTCCA TGCCCAGCAT
CAGCAGAGCC GCGAAATTGC ACCGCTAATC AGTTTATTGG TGCTCGATGA TGAAAACCCT
CGCTCATTGG CATGGGTTAG TAAAGCTCTA CGTGCTCGAC TATCAAAGTT AGCTGGCACC
GAGCGCAATA ATCCAGATCA ATTAACAAGA AGTGTGACCA ATCTTCAAGA TTATGATTTG
TATAAGCTAT CTTCTGTTGA TGGTTATGGT AATTTCTTCG AATTACGAAA CTGCTTGTAT
GCCACATCAC AATCAGCCTG GAATGTTTCT GATGCCATTG GCGCGCGCTA CTTTACGTTA
ATCCACGCTA ATGAATACAG CGTGCAATTT TAA
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| Protein sequence | MDASQASPLK SITNPSLVDE ITRLAPKASE GHFDELRGNG SELLPHWKTF FDQLEPSGLS
DLDQRTLELD RQVRENGITY NVYADEFGPQ RPWSVDLFPL IINTESWQEI QSGVLQRARL
LEAIVQDIYG PQTLLKEGYI PPALVYGHPG YLRSMHGAKL NNRKHLHIIA FDLARAPNGK
WSVLSQRTQA PSGLGYLLEN RNLIARQFPA AYEAMQITPL ANAYRDLIDA LKLESPAGSN
AHIALLTPGP YNETYFEHAY LARYLGLTLV EGGDLTVRDQ RLYLKTVRGL EPVDILLKRL
DDEFLDPLEL RSDSTLGVPG LMQVIRAGNV ILANAPGSAF LESPALLGFL PAISEHLLGE
EIQLPAMDTW WCGERAALEA AIPNLGHSAI KPTYPNGSGH QNYESALGGE LSQAQLDQWV
GRITRQPDEH TVQTYIPLAQ MPTWLNAFNL NDASLIEPHS YMLRVFALSN GADSWQVLPG
GLARIAGNNS GVASMQRGGS SADVWVQTQQ SNANQENHTQ QVAPNKEILL RKRMVTSRAA
ENLYWFGRYT ERSENILRLA KLYLENINSE YTPSRSLWSW LENLCHHYGL VPDGVPSNFD
QGDIRHRIFE RTLVHSLNAS ENVTSVGFNL NAMKRTASNV RERLSTEQWS TINHCIDQFE
QDCHKANSFH DFSSSLAIDA LKQASSSLAA ITGAQTDRMT RDDGWQLLSI GRHIERLSFL
TTVLDSAIQA GLLNNPNSDS SGYTALLNLF DSTITFHAQH QQSREIAPLI SLLVLDDENP
RSLAWVSKAL RARLSKLAGT ERNNPDQLTR SVTNLQDYDL YKLSSVDGYG NFFELRNCLY
ATSQSAWNVS DAIGARYFTL IHANEYSVQF
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