Gene Pnuc_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1203 
Symbol 
ID5053453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1259689 
End bp1260993 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content44% 
IMG OID640471375 
Productsecretory lipase 
Protein accessionYP_001155982 
Protein GI145589385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TTGCTTGTTT TTCAGTTTTA ATGCTCGGTT TTCTCCTCAG CATTTTTTCT 
TTTGCCGTAT GTGCTGAGCC GCCCATGCAG CCTTTTTATG CTGCCGTCAT GAAGATGGCT 
CCCGAAGGTA AATTAGGGCA GGTAATCAAA CAGGAGGAAG TTGTAACGGC TGTTAAGGGA 
GCTCAGGCTT GGAGAATTGC TTATATTTCA TCGGATGTAA CTGGCCTTAA AACTATTGCC 
ACTGGTTTAG TTGTTGCTCC TACGAGCCCT GCACCAATGG GTGGCCGACC AGTGATGTCT 
TGGGGACACG GGACAACTGG CACGGCTCAA AATTGCGGGC CTTCTCAAAT TTTTAATCCT 
GTAGTTCCTT TGAACGAGTA TTTTTTACTT GGAGGAAATT CATGGTCAGA TTATGGAATT 
CCGGCCATCG AAGAATTCAT TAAGGAGGGA TATATCGTAG TTGCAACCGA CTATCAGGGC 
TTAGGCGGCG GTGGTAGACA TCAATACACA ATTGCCACTT CCAATGGCAT GGATACCATA 
AATGCTGCAC GCGCAGCAGG TTCTATGAGT GAAACAGGGG CCAATAAAAA GACCTTGATT 
TATGGCTGGT CAACAGGCGG TGGTGCAGCA ATTGCGATAG CGGGGATGCC TGACTACATC 
AATCAAACAG GTACGGCTTG GGATAACCTT GATGTCATTG GCTTTGTTGC TTTAGCTCCA 
GAGGATATTT CAATATTAGT ACCTCCAGGA AAACTAAATC AGGCTGCTGC GGATAAATAC 
TTCGCAGATT CTCAAAAGAT GTTTTTAAAT AATGTCTTTA ATTTCACGCA TACAGCAATG 
TTCTACTGGG GCACCCAAGC GGCTTTCCCT AATCTCAAGT TGACCGATCT CTTTATGGAT 
GAGGGTGCTA AGGTTGTTAA TGAGATTTTG GACAACAAAT GTATGCATGC TTCAAGTGAT 
ACTTTTAACT TCTTATATGG TTCAAGCTAC GCAACTCTCT TGAAGAAAAA ACCATCAAAT 
ACTTTAGCGT GGACAGAGGC AATGTTAAAA GGCGGCGTCT TATCTGTGAA GCCTCTTGCT 
CCTGTGCAGA TTTATTTTGG ATCAAAAGAT ACAACCGTTC CGCCAATCAT GCATAAGATA 
TATCAGGAGC AAGTATGTAA ATTGGGTGGT AATGTTGGGA GAATGCAGTT GCCGGGTGAG 
CAGACTCACT TTACAACTCC CGGGGTATCC AGGCCATTCT ATTTGTCTTG GATCAAAGAT 
CGTGTAGCTG GTAAGCCCTT AGCAAATGCT TGCCCTAAAT CTTGA
 
Protein sequence
MKQIACFSVL MLGFLLSIFS FAVCAEPPMQ PFYAAVMKMA PEGKLGQVIK QEEVVTAVKG 
AQAWRIAYIS SDVTGLKTIA TGLVVAPTSP APMGGRPVMS WGHGTTGTAQ NCGPSQIFNP 
VVPLNEYFLL GGNSWSDYGI PAIEEFIKEG YIVVATDYQG LGGGGRHQYT IATSNGMDTI 
NAARAAGSMS ETGANKKTLI YGWSTGGGAA IAIAGMPDYI NQTGTAWDNL DVIGFVALAP 
EDISILVPPG KLNQAAADKY FADSQKMFLN NVFNFTHTAM FYWGTQAAFP NLKLTDLFMD 
EGAKVVNEIL DNKCMHASSD TFNFLYGSSY ATLLKKKPSN TLAWTEAMLK GGVLSVKPLA 
PVQIYFGSKD TTVPPIMHKI YQEQVCKLGG NVGRMQLPGE QTHFTTPGVS RPFYLSWIKD 
RVAGKPLANA CPKS