| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1202 |
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| Symbol | |
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| ID | 5054012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1257762 |
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| End bp | 1259021 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471374 |
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| Product | putative urea/short-chain amide-binding signal peptide protein |
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| Protein accession | YP_001155981 |
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| Protein GI | 145589384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA GATCAATTTT GAAGTTATCA GCATTAGCAG CGGCTTTAAG TTTTGCAGGC
TTTAGTCATT TAGCAATAGC TCAAAGCAAA GAACCAATTA AGGTCGGTAT TTTGCATTCC
TTGTCTGGAA CCATGGCAAT TTCTGAAACA TCACTAAAAG ATATGGATTT GATGGTGATT
GATCAGATTA ACAAGAGTGG TGGTGTTTTA GGTCGCAAGC TTGAACCAGT AGTCGTTGAC
CCAGCCTCAA ATTGGCCATT ATTTGCAGAG AAGGCGCGAC AGCTCTTAAC TAAAGATAAG
GTTTCGGTTG TTTTTGGTTG CTGGACTTCT GTCTCACGTA AATCTGTATT GCCGGTCTTT
GAAGAACTCA ATGGCTTGCT CTTTTATCCC GTGCAGTACG AGGGCGAAGA AATGTCTCGT
AATGTGTTCT ATACCGGTGC TGCACCAAAC CAGCAGGCTA TTCCAGCCGT TGAGTACCTA
ATGAGCAAAG AAGGTGGTGG CGCTAAGCGC TGGGTTCTCT TGGGAACTGA CTATGTCTAC
CCACGCACTA CAAATAAAAT CTTGCGCGCT TTCTTGCATT CAAAGGGCGT AAAGGATGAT
GATATTCAAG AAACTTACAC ACCATTTGGT TTCTCTGATT ACCAGACTAT TGTTGCCAAT
ATAAAGAAAT TCTCCCAGGG CGGTAAGACT GCGGTTGTAT CTACCATTAA TGGCGACTCA
AACGTTCCTT TCTATAAAGA GTTGGGTAAT GCTGGCTTAA AAGCTAAAGA TGTTCCAGTA
GTAGCATTTT CTGTTGGCGA GGAAGAGCTA CGCGGTGTTG ATACCAAGCC CTTGGTTGGT
CAGCTAGCCG CATGGAACTA CTTCATGTCC ATTAAGAATC CAGTTAACGA CGAATGGAAA
AAACAATGGG CAGCTTACTC TACCGAGAAG AAACTTCCAG GCGCAAGCAA GCCTTTGACT
GATGACCCAA TGGAAGCAAG CCGTACTGGT ATCTTGATGT GGAAAGCGGC CGTTGAAAAA
GCAGGAACTA CTGATGTTGA TGCTGTGCGT AAAGCAATGA TTGGCCAAAA ACTCAACACT
CCAAGTGGTT ATCTTGAAGT GATGGGCGCT AATCACCATT TATCTAAGCC AGTTATGATC
GGCGAGATCA AGGCGGATGG CCAGTTCAAT GTGATTTACA AAACTCCTAC AGCTATTCCA
GCTAAGCCTT GGAGTCAGTA CATCGACGGT AATGCAGGCA AGCCTGATTC AGTACAGTAA
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| Protein sequence | MKRRSILKLS ALAAALSFAG FSHLAIAQSK EPIKVGILHS LSGTMAISET SLKDMDLMVI
DQINKSGGVL GRKLEPVVVD PASNWPLFAE KARQLLTKDK VSVVFGCWTS VSRKSVLPVF
EELNGLLFYP VQYEGEEMSR NVFYTGAAPN QQAIPAVEYL MSKEGGGAKR WVLLGTDYVY
PRTTNKILRA FLHSKGVKDD DIQETYTPFG FSDYQTIVAN IKKFSQGGKT AVVSTINGDS
NVPFYKELGN AGLKAKDVPV VAFSVGEEEL RGVDTKPLVG QLAAWNYFMS IKNPVNDEWK
KQWAAYSTEK KLPGASKPLT DDPMEASRTG ILMWKAAVEK AGTTDVDAVR KAMIGQKLNT
PSGYLEVMGA NHHLSKPVMI GEIKADGQFN VIYKTPTAIP AKPWSQYIDG NAGKPDSVQ
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