| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1201 |
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| Symbol | |
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| ID | 5053444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1256125 |
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| End bp | 1257708 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471373 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001155980 |
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| Protein GI | 145589383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCC CATTTTTTTC AAAACTAATC TTTTCGGCTA TTTGTATTTT TGCTTGCGGG
ATTACTTTTG CAAAAATTAG CGTTGGAGAT TTAAAGCCCC TATTTACTGA TAACTTTGAC
GCCAAAGTTA AGGTTGTTCA GAGCCTATCG AAAGAGGGTA GCCCTGAGGC ATTAGACATT
CTTCAGGCTT TAAGTTCTGA AAGTCTTTTC TTGTCGCCAC AGGGTGTTGT TATTCAAAAA
GGCGATCAGC ATATCGATCC TTTGACCGGA CAAGCTGCTT CTGTAAAGTC AGAAGAGCTG
CAAGATGTAG TTTTGAATAA TCAATTGCGC GGTAAAGTAG ATAACGCATT GCTGGGTTTA
CAGTTAGCGT CCACAGATCC TCAGATTCGC GCAAAGGCTA TAGATGCGTT AATTAAAGAT
CCTGAGCCAG ATACCTTTCC TCTAGTAGAA AAATTGCTTA TTTCTGAGCA GGATCCCGCA
CTAAAGCCAA AAGTAGAAAA GCTTTGGGCC CTTCTAGCTT TGCAATCTGA TAACCAAGAA
TCCAAATTAA AAGCTATCGA GCTACTTGGT GATAGTGGTG ATCCGCAGGT TGCTGCATTA
CTGGCGCCTT TAGCAAAAGA GGGCGGTCCA GTGCAGGAGG CAGCTGAAAA AGCGATAGCC
AAAATTAAGA AATCGGAGTT TAGTGGCGAA ATTCTTGGTA ATGTGATTGC TGGTTTAAGT
TATGGAAGTG TCCTATTGCT TTGCGCTCTT GGCTTGGCCA TTACTTACGG CTTAATTGGG
GTCATTAACA TGGCGCATGG TGAGTTCCTG ATGGTCGGTG CTTACGCAAC TTATGTTGTA
CAAGGATTTT TTAGGCAATA TGCACCAGGT TATTTGGACT GGTATTTATT ATTTGCCTTA
CCGGTAGCCT TTTTATCTGC AGCACTCGTT GGCATATTGA TCGAAAGAAC GGTGATCAAA
TTTTTGTACG GTCGCCCCTT GGAAACCTTG CTAGCTACAT TTGGCGTAAG CTTGCTCATG
ATCCAGATGA CAAGGACTAT TTTTGGGGCA CAAAACGTTG AGGTCGCTAA CCCAATTTGG
ATGTCTGGTG CTATGCAGGT ATTACCTAAT TTGGTTGTAC CTTATAACCG CATCATTATT
TTTGCTTTTG CGATTGCAGT AGTGATCGTC ACTTGGCTAG TTCTGAATAA AACTCGTCTA
GGGCTTTTCG TTAGAGCAGT TACACAGAAT CGCACTATGG CCGCGTGCGT GGGTGTCAAA
ACAGTTCGTG TGGATATGTA TGCCTTTGCA TTTGGTGCTG GCATTGCAGG CTTAGGGGGT
GTTGCGCTTT CTCAGATTGG TAATGTTGGA CCTGACTTGG GCCAAAGTTA TATTGTTGAT
TCTTTCATGG TAGTTGTCCT AGGTGGCGTT GGTCAGCTTG CAGGTACTAT TTATGGTGCA
TTTGGGCTGG GCATCACAAG CAAGCTACTT GAGCCTTTCA TTGGCGCTGT ACTGGCTAAG
ATTGCCATCC TGATATTCAT CATTATCTTT ATTCAAAGAC GTCCCCAAGG CCTCTTCGCG
TTAAAAGGCA GGAGCGTTGA TTAA
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| Protein sequence | MKFPFFSKLI FSAICIFACG ITFAKISVGD LKPLFTDNFD AKVKVVQSLS KEGSPEALDI
LQALSSESLF LSPQGVVIQK GDQHIDPLTG QAASVKSEEL QDVVLNNQLR GKVDNALLGL
QLASTDPQIR AKAIDALIKD PEPDTFPLVE KLLISEQDPA LKPKVEKLWA LLALQSDNQE
SKLKAIELLG DSGDPQVAAL LAPLAKEGGP VQEAAEKAIA KIKKSEFSGE ILGNVIAGLS
YGSVLLLCAL GLAITYGLIG VINMAHGEFL MVGAYATYVV QGFFRQYAPG YLDWYLLFAL
PVAFLSAALV GILIERTVIK FLYGRPLETL LATFGVSLLM IQMTRTIFGA QNVEVANPIW
MSGAMQVLPN LVVPYNRIII FAFAIAVVIV TWLVLNKTRL GLFVRAVTQN RTMAACVGVK
TVRVDMYAFA FGAGIAGLGG VALSQIGNVG PDLGQSYIVD SFMVVVLGGV GQLAGTIYGA
FGLGITSKLL EPFIGAVLAK IAILIFIIIF IQRRPQGLFA LKGRSVD
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