| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1198 |
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| Symbol | |
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| ID | 5053568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1253491 |
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| End bp | 1254183 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471370 |
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| Product | ABC transporter related |
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| Protein accession | YP_001155977 |
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| Protein GI | 145589380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0175131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATCG TCAAAGATCT CAATCAATAT TATGGTGGAA GCCATATTTT GCGTAATGTG
AATTTTGAAG TCCCCAAGGG TCAATTAACC AGTTTGCTTG GGCGTAATGG CGTTGGCAAA
ACCACTTTGC TCAAATCGCT TATGGGTGTG GTGAAAGTAA AGACTGGCTC GATTGCTTGG
GATGGAAAAG AATTGGCCAA TCTACCCCCG TGGTCTCGGG TGGACGGTGG ATTTGCCTAT
GTTCCTCAAG GTCGAGAAAT TTTCCCAAGA CTCACAGTCG AAGAAAACCT GCTCATTGGG
GCAGCAAAAT TCTCAAGCCC AAAAAATATC CCTGGATATA TCTACGAGCT ATTTCCAATT
CTGTCGGATA TGAAGGCGCG TCGGGGCGGT GATTTATCAG GAGGCCAACA ACAGCAGTTA
GCAATTGGGC GTGCATTGAT GTCTCAGCCA GAGTTGATCA TTTTGGATGA GCCTACCGAG
GGTATCCAGC CATCTATCAT TCAGGATATT GGGCGCTGTC TTCGTAAATT AGTTGATGAG
ATGGGTATCA CTGTTTTATT GGTAGAGCAG TATTACGATT TTGCAAAAGA GCTCTCAGAT
AACTATATTG TGATGCGCCG CGGTGAAGTC GTCGCGCAAG GCAAAGGTGC TGATATGGAT
CTGAATGGTG TTCAGGAGAT GATTTCGGTT TAA
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| Protein sequence | MLIVKDLNQY YGGSHILRNV NFEVPKGQLT SLLGRNGVGK TTLLKSLMGV VKVKTGSIAW
DGKELANLPP WSRVDGGFAY VPQGREIFPR LTVEENLLIG AAKFSSPKNI PGYIYELFPI
LSDMKARRGG DLSGGQQQQL AIGRALMSQP ELIILDEPTE GIQPSIIQDI GRCLRKLVDE
MGITVLLVEQ YYDFAKELSD NYIVMRRGEV VAQGKGADMD LNGVQEMISV
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