| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1187 |
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| Symbol | |
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| ID | 5053141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1245892 |
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| End bp | 1246662 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471360 |
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| Product | ABC transporter related |
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| Protein accession | YP_001155967 |
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| Protein GI | 145589370 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.2493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA ATCCGCCACG CACGCACGTC ACTATTGGGA ACTTATGCAA GGAATTTGGT
GGTGCAACTC TTTACAAAGA CTTTAACCTT GAAATTCCGT ATGGAAAGAT TATTTCTATA
TTTGGGCCTA ATGGTTGCGG AAAATCTACT CTTATTAATA TGATCGCAGG GCTAATGCCC
TATGACTCCG GTCAGGTCTT GTTTGATGGA AAAGATTTAA AAGATACTAA GATTGGGTAT
GTCTTTCAAA ACTACAGAGA CGCTCTATTT CCATGGATGA GTTCCCGGGA CAACATAGCC
TATCCGCTAA GGCGGACTGG AATGAGCGAG GCTAAAGTAA GTGCTCGCGT TGAAGAATTA
GTTCAGCTAT TTGAAATACG CTTCAATCTG GATCTATACC CTTATGAGCT TTCTGGTGGA
CAACAGCAAA CCATATCAAT CATGCGGGCC TTAGCGCCTA AGCCAGAGAT ACTCTTCTTA
GATGAGCCGT TCTCAGCCTT AGACTTTGAA ATGACGCTCT TTATAAGAGA AAAACTGCAA
GAGGCGAACA TTACCACCGG TACAACAATG ATGATCGTCT CCCATGATCT TGAAGATGCA
GTCTTTCTGG CCGATGAAAT TTTGCTTCTT ACAAGAAGAC CAACGGCGAT TGCCTCTCTT
TTATATTTTG ATATGCCAAA ACCACGTCTT CCTGAAGCAG TAAGTCATCC TGATTTCATT
CAGATCAAGT CAAAAGCCCT TGAAATCTTT CAAGCAGAAA TGCGAAAATA A
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| Protein sequence | MSQNPPRTHV TIGNLCKEFG GATLYKDFNL EIPYGKIISI FGPNGCGKST LINMIAGLMP
YDSGQVLFDG KDLKDTKIGY VFQNYRDALF PWMSSRDNIA YPLRRTGMSE AKVSARVEEL
VQLFEIRFNL DLYPYELSGG QQQTISIMRA LAPKPEILFL DEPFSALDFE MTLFIREKLQ
EANITTGTTM MIVSHDLEDA VFLADEILLL TRRPTAIASL LYFDMPKPRL PEAVSHPDFI
QIKSKALEIF QAEMRK
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