Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1185 |
Symbol | |
ID | 5052771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1244124 |
End bp | 1245119 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471358 |
Product | ABC transporter, substrate binding protein |
Protein accession | YP_001155965 |
Protein GI | 145589368 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.987715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCAA AAAAATTCTC TAGACGCGAC ACACTGGTGC TCGGCATCAA ATCTAGCCTT GCCTTGGCCA TGGGATCTAT CGGCCTAAGT GCAAAAGCAC AAGAAAAGAA GTTATTAATT GGATATTGGC CCATTGCAGC CGGCCTACCT TTTTATGCTG CCGTCGATCG TGGTCTCTTC AAACAAGCAG GAGTAAATGT AGAGGCCGTG AAGTTTGCAA GCCCAAATCA GGTAGTAGAG GCCATGATTG CAGGCAGGAT TGATGGTTGC GCAAACGGGG TAGCTATCAC AGCACTCGCA TTAGCTGATG CACAATCACC GGGTTCCATT AAATTCACTT GCATGAACTA CGCAAACGAA AAATATATCC TGGACCAGGT TATCGTTCCA ATTAACTCCA GTATTAAGGG GATTTCTGAG CTTGCCGGGA AAAAAGTTGC CTGTGGTCCC GGAATCAATA ATGTCACCCT CGCTAAGGCA GTGCTAGCAG GCGCGGGAGC GACTAATGCT CAAGTCATTG AGTTGCCTAT CGCCCAAATC CTACCGGCCT TAGTGGCCGG TCAAATTGAT GGGGCCTATG TACTAGAGCC AACTGCAGTC ATTGGAAAAC AACAAAAAAT CTCACGCTCA ATTGGCGCAG GAGTGGTATC AAAATATGTT TTAGGCGATA ACCTTCCTTG GATAGGCGGC GCAGCTGCAC TCACCTCTAA GACGCTAAAA GAAAAAGCGG ACTTAATTAA TGGATTTATT AAAGGGTATG CAGGGGGCGT TGAGTATGTT CGCAAAGAGG GTATGGCTGC CAATCAATAT CTAAAAGGCT ATACAGCGAT TGACGGCGAT TTAGCCAAAG AGGTGCCAAT TAGCGGATAC ATCCAATATA ACGAAGTGAA AGCTGCTGAT GTAAAGGCAT TGCAACGACT ATTTGATGTA TTTACCGAGC GTAAAGTTTT TGAAAAACCT ATATCGGCAC TAACACTTAT CTACAAGCAG TCCTAA
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Protein sequence | MNSKKFSRRD TLVLGIKSSL ALAMGSIGLS AKAQEKKLLI GYWPIAAGLP FYAAVDRGLF KQAGVNVEAV KFASPNQVVE AMIAGRIDGC ANGVAITALA LADAQSPGSI KFTCMNYANE KYILDQVIVP INSSIKGISE LAGKKVACGP GINNVTLAKA VLAGAGATNA QVIELPIAQI LPALVAGQID GAYVLEPTAV IGKQQKISRS IGAGVVSKYV LGDNLPWIGG AAALTSKTLK EKADLINGFI KGYAGGVEYV RKEGMAANQY LKGYTAIDGD LAKEVPISGY IQYNEVKAAD VKALQRLFDV FTERKVFEKP ISALTLIYKQ S
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