Gene Pnuc_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1183 
Symbol 
ID5052274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1242015 
End bp1242830 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content42% 
IMG OID640471356 
Producthypothetical protein 
Protein accessionYP_001155963 
Protein GI145589366 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.716551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAA ATTTTTCTAA AGAGAATTTA GATAAGGCTT ACAACAATTC TTTAGCCGTT 
GCTAATAGCG CAGAGATCGT GCGGTCATGG GTTCAGTCTA GTATCTCGGC CAAGGAAAAA 
CTACCTGGGG ATTGTGATAT TTCTTATGGA GATACCAAAT TTCAATCTTT CGATTTTTTC 
TCCGCGGGAG ACAATGCTCC CGTTATCGTA TTTCTGCATG GCGGGTTTTG GCAGATGCGG 
TCTAAGGATG ACTTTACTTT CGTTGCTCCC CCATTGGTTC AGGCGGGTTT TAGCGTGGCA 
ATGCTCGGGT ATCGTTTGGC GCCTTATGCC AATATGCATG AAATTGTTCA GGATGTAAGG 
GGCGGTCTAA AAGCAATTGG CGTCTACATG AATAAGAAAC AGATGGTTCC TCAAGGTCTA 
TGGCTAATAG GCTGGTCTGC GGGCGCCCAT CTTATATCAA TGGTTCAGGA TGAAGAGTGC 
GTCCTTGGGG GTACTGCAAT TAGTGGAATT TACGATTTAG AGCCAATGAG GCATTGCTAT 
ATCAATGAAA AACTAGCGCT GGATGAAGGG ACTTCATTAA AGAATTCACC AATTTTGCTT 
CAGCAAAATA CGTCCAGGCC CCTAGATATC TTTGTAGGTG GCTCTGAATT GCCAGAGATG 
CAAAGGCAGT CGCTTGATTT TTCTGCCTAT AGAAATTCAA CTGAGGCGGA GGGTATTTTT 
AAAACCATCC CCGAAAAAAA TCACTACACA ATACTAGATG AACTGACGGA TAAAAATGGA 
GAGATATTTA AAGCTTTAGT CAGTCGTTTA ATTTAA
 
Protein sequence
MWKNFSKENL DKAYNNSLAV ANSAEIVRSW VQSSISAKEK LPGDCDISYG DTKFQSFDFF 
SAGDNAPVIV FLHGGFWQMR SKDDFTFVAP PLVQAGFSVA MLGYRLAPYA NMHEIVQDVR 
GGLKAIGVYM NKKQMVPQGL WLIGWSAGAH LISMVQDEEC VLGGTAISGI YDLEPMRHCY 
INEKLALDEG TSLKNSPILL QQNTSRPLDI FVGGSELPEM QRQSLDFSAY RNSTEAEGIF 
KTIPEKNHYT ILDELTDKNG EIFKALVSRL I