| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1180 |
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| Symbol | |
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| ID | 5053651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1239214 |
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| End bp | 1240185 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640471353 |
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| Product | putative ABC transporter, periplasmic protein |
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| Protein accession | YP_001155960 |
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| Protein GI | 145589363 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGA TTTACAAAAA GCTACAAGTA ACGGTTGCTG CAATAGCTAT TGCTGGCATG
TCGTTTAGTG CTGCCGCAGA AGTAAAAACA GTCACTATCT CTCAGGCATT TCAGTCAATG
TTGTATCTAC CTCTTTATGT CGCAATTGAT AAAGGCTTCT TTAAAGACCA AAGCTTAAGT
GTGATTAAAG AAACTGCTGG ATCTCCTACT GCAGCTTTAT CTTCAGTTCT TTCAGGAAGT
TCACAGTTTT CAATTCATGG TCCAGAATGG ACTGCTATTG CCGCTTCAAA AGGCGCCAAT
GTCGGAATTA TTAGTAATGC TGTTAACGGC GCAGCTGTAT GGATTGCAAC AGCTCCTGAT
GTGAAATTTA CGAATATTAA GGACATCAAG GGTCAAAAAG TAGTTACCGG TTTAATGCCA
ACGACTAGTA CCTCCTTGTT CCTTAAGTTG CTCAAGGAAA ATGGCATGAG TGATAAAGAT
ATCGATATGA TCCAAGTTCC TCTAGGTACA GAACCTGCGG CGCTATTGGG TGGTCAGGCA
AAGGTAGCGG TGTTGTATGA GCCAGGCCTA GATCAAGTGG CGATCAAAGG AATGAAGGTT
GTTTTAGGTT TCCCAAAAAC TTATGGCGCT TATGCTTTCT CATCCATTAC TGCAATGAAG
ACAGTAGATC CTGTAGCTGC TCAGAGAATG GTTAATGGTA TGGAAGTTGC ACTTCGTTAC
ATGGCTAAAG ATCCTAAAGG TACTATCGAG ATTGCTAAGA AGGAGTTTCC AACACTTGAT
CCACAAGTTG TTGAAAATGC GGTAACTCGT ATGATGAATG AGAACGTATT TCCTAAGAGT
GTTCAAATTA CACCGGCAGC TCTCAAGATT GCAATGGATA CACAAATTGC TTTAGGTAAC
CTAAAGGAGC AACCTGTATT TGAAAACTTT ATTAACGAAA CCTATATTCA AAACGCTTTG
AAATTGAAGT AA
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| Protein sequence | MKSIYKKLQV TVAAIAIAGM SFSAAAEVKT VTISQAFQSM LYLPLYVAID KGFFKDQSLS
VIKETAGSPT AALSSVLSGS SQFSIHGPEW TAIAASKGAN VGIISNAVNG AAVWIATAPD
VKFTNIKDIK GQKVVTGLMP TTSTSLFLKL LKENGMSDKD IDMIQVPLGT EPAALLGGQA
KVAVLYEPGL DQVAIKGMKV VLGFPKTYGA YAFSSITAMK TVDPVAAQRM VNGMEVALRY
MAKDPKGTIE IAKKEFPTLD PQVVENAVTR MMNENVFPKS VQITPAALKI AMDTQIALGN
LKEQPVFENF INETYIQNAL KLK
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