| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1177 |
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| Symbol | |
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| ID | 5052087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1235365 |
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| End bp | 1236408 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471350 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001155957 |
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| Protein GI | 145589360 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT GGACTGACCG CCATTGCCGC TCTTTTCATC GCGCACTAAC TACAGAGGCA
GTTCTCTATA CCGAAATGGT AACAACGGGG GCGCTGATGC ACGGCGATGT ACCACGTCAT
TTGGATTACT CGCAAGATCA ACATCCAGTG GTATTGCAGT TGGGTGGTTC AGAGCCAAAT
GATTTAGCTC GGTCTGCTGA ATTAGCTCAG CAGTGGGGCT ACGACGAAAT TGATTTGAAT
TGTGGTTGTC CCTCAGAGAG GGTTCAACGG GGTGCCTTTG GTGCCTGCTT AATGGCTGAG
CCAAAACTGG TAGCTGATTG TGTCAAGGCA ATGCAGAATG CAGTAGATAT TCCGATTTCA
GTAAAGCATC GGCTAGGATT AGATTCAATG GATGCCGCTA ATTCAGAAAA AGATTATCAG
TTCGCGCTGG ATTTCATCAT GGCCGTAGCT GATGCTGGTG CCAGTCAGGT GACGATTCAT
GCGCGCAATG CAGTGCTTAA AGGTTTATCG CCTAAAGAGA ATCGTAGTAA GCCGCCATTG
CGTTATGAGG TTGCCGCCAA GCTTCGCTTA GATGCGCAGA AGCAATTTCC CAATCTAAAA
GTTTTACTCA ACGGCGGTTT AGAAAGCAAT GATCAGATTG CCGGTCATTG GCATGACTTT
GATGGATTTA TGGTGGGAAG GGCGGCATAT CATTTTCCGG CAATGCTCTT GGGCTGGGAT
GACATGATCA ATACCAATGG CGATGCTGCA GGTTATCTTT TTAGCGAGAC TGAATGGCAT
CGCATACAAA TTGCTTTAGT AAAACAAGTG CAATCATGGT TTGATGAGTG CCAAGCCAAA
GGTAAGCCTT TCTATATTGG CGCATTCACA AGACATATCC TAGGTCTCGC TCATGGCAGG
GCAGGTTCAC GGTATTGGCG CCAAAGACTG TCTGATCACC ACGCTTTGGC CAAGGTGCAA
AGCAAAGCAG CTATATTGGA TTTCTTTATC GATGCAAGCT TAACCCTAGG GGATTGGGCC
GCTTTTGACT TCGAAAGCGC CTAA
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| Protein sequence | MMEWTDRHCR SFHRALTTEA VLYTEMVTTG ALMHGDVPRH LDYSQDQHPV VLQLGGSEPN
DLARSAELAQ QWGYDEIDLN CGCPSERVQR GAFGACLMAE PKLVADCVKA MQNAVDIPIS
VKHRLGLDSM DAANSEKDYQ FALDFIMAVA DAGASQVTIH ARNAVLKGLS PKENRSKPPL
RYEVAAKLRL DAQKQFPNLK VLLNGGLESN DQIAGHWHDF DGFMVGRAAY HFPAMLLGWD
DMINTNGDAA GYLFSETEWH RIQIALVKQV QSWFDECQAK GKPFYIGAFT RHILGLAHGR
AGSRYWRQRL SDHHALAKVQ SKAAILDFFI DASLTLGDWA AFDFESA
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