| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1174 |
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| Symbol | |
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| ID | 5053386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1232518 |
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| End bp | 1233342 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471346 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001155954 |
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| Protein GI | 145589357 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAG CAATCTTTTT TTATGTCCTA GCAATAATCT TGCAGCTATT TGCTGCCAGC
TATGCAGCCA CTATATTTTT TAAGTCTGCA GCATTTCGCA AGTCCAGCGG GGTCTTAGCA
TTGGGGCTGC TCCTCATGAC TGAGCGACGG ATTGAGCCCT TAATCGAGAT GTATCAATCC
CAGCAATACA GCATCGATGA AGCAATTTTT TCCCTCGTAA TATCAAGCCT GCTTTTATTG
GCGATGAGCC AAATTAAAAA GTTAATAGCC TTGCTTGAGG AGCAGAACTT TATCCTAGAT
CGGACTTCCA AGACCGATTC CCTAACGCAG GCTACAAGTC GTCCCGAAAC CTTTAATAGG
GCGGAGCTAG AAATTGAAAG AGCATTGCGT AGCAATATTC CAGTCGCCTT TCTCATGCTC
GATATTGACC ACTTTAAGAA AGTGAATGAT CAATATGGCC ATCCTGCAGG AGATCTGGTT
TTACAAAGCC TTACAAAATA TTGTCAAGGG GAGTTGCGGG TAGTTGATAT ATTTGGTCGC
GTAGGTGGGG AAGAATTTCT AATTGTGTTG CCTGAGAGTT CAGAGGCTTT GGCCTTTGAT
GTTGCAGAGC GCCTGCGTAA AAAAATTGCT TCTTCCGTTG CGGTGGTGGT TGATGGGCAT
GAGGTGTTTA TTACGGTAAG TATCGGCATT GCCATTTTTG ATCCCGTCCT TAACGGGGAA
ATTCGCCCTA AAGTCATATT AAATTCTGGC TATAAGCGGG CTGATGAGGC CCTATATTTG
GCAAAATCTA ATGGTCGAAA TCGTACTGAA TCTTGGAGTT GCTAG
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| Protein sequence | MYIAIFFYVL AIILQLFAAS YAATIFFKSA AFRKSSGVLA LGLLLMTERR IEPLIEMYQS
QQYSIDEAIF SLVISSLLLL AMSQIKKLIA LLEEQNFILD RTSKTDSLTQ ATSRPETFNR
AELEIERALR SNIPVAFLML DIDHFKKVND QYGHPAGDLV LQSLTKYCQG ELRVVDIFGR
VGGEEFLIVL PESSEALAFD VAERLRKKIA SSVAVVVDGH EVFITVSIGI AIFDPVLNGE
IRPKVILNSG YKRADEALYL AKSNGRNRTE SWSC
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