Gene Pnuc_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1168 
Symbol 
ID5052126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1222960 
End bp1224504 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content42% 
IMG OID640471340 
Producthypothetical protein 
Protein accessionYP_001155948 
Protein GI145589351 
COG category 
COG ID 
TIGRFAM ID[TIGR03368] cellulose synthase operon protein YhjU 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.710032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTTT GGGCATTTTA TTTTCTGATC AAAATTATTC TGTTTTATAC GGGATATATT 
AATTTTCATT TCTTCGTCAA TCTGGCGTTT GCACTGGCTT TAATTTTTTC TCATGCACGC 
CCACGGCTTC TTCAAATAAA GCGATGGGTA GCAATTCCTA TTGGCATCAT TCTTTTTTAC 
TTCGATAGCC CGTTGCCACC ATTGAGAAAT ATCATTGCCA AGCTGGATCA GTTGCTGGGA 
TTTAGCTTTA ATTACTATAT TGAATTATTG GGACGCATCT TAGATTGGCG GATCCTTGTA 
GCGTTAGCAG TGTCATTTGT GATCTATTAC GCACTATCCA AAAAAATTCG CATGACGACA 
ATTGCAATGC TGGCTATTTT CAGTGTCCTT TTGCCGTTTC ACTCCAATTC CAGCATGCAG 
GCTTATGACT CAGATGGTCA AGTGATTGGC ATTCCGAGTG ATGCAGTGTT GACTGAATCA 
TTAGATGGCT TCTTTGTTGA AGAATCTGGG CGCACCGGCT TTAATCGCTC ACAAAAGGCC 
AGTGGACAAG CCTTTGATAT CTTGGTCATC AACGTTTGCT CACTCGCTTG GGATGACCTG 
AAATACGTCA AGGAAGAAGA TAATCCCCTC TTTAAACGCT TTCACTATTT ATTTACTAGC 
TTTAATTCAG CTTCCTCTTA TAGCGGGCCA TCGATCATTC GCTTGTTGCG CGCAAGCCGC 
GGTCAACAAG ATCAAAGAGA TTTATATAAA AAACCAGTTG AGGACTCTTT ACTTTTCAAT 
AATCTCAAAA CTGCTGGATT TCAAACGCAG TTCGCCTTAA ATCATGATGG TAAGTACGGC 
GATCTTTTAC AGGAAATTCG GACTGATGGT GGTCTGAGCG CTCCCCTCTT TGACAATAAA 
CAGGCTACAC CTTACTTAAG GGCCTTTGAT GGATCGCAGG TTTACGAAGA CTATTCAGTG 
CTATCTAATT GGTGGGATGC GCGGATGAAG CTACCCGCTG AGCGAGTGGC CCTTTTTTAC 
AATACGATCA CCCTGCATGA TGGTAATCGT GCCCTAGATG GAGCAAGACT AGAAAATAGT 
GTTGAAACGT ATTCTCGTAG ACTACATAAG CTACTGGAAG ATGTTGATCG CTTCTACACT 
AAAGTGAATA ACTCCGGCCG CCAAGTAGTG ATTGTGTTTA TACCGGAGCA TGGGGCAGCT 
ATTCGCCGCA ATAAGAATGA AATTGTCGGT ATGCGGGAGA TTCCAAGCCC TAATGTCACC 
AACATCCCGG TTGGGATCAT GCTGACCAAT AAGTCAGATA GCCCCTTCAA GACAAATAGA 
ATTGATCAAC CTACAAGTTA TTTAGCAACA TCAGAATTGA TATCAAAGTT TGTTGCCAAA 
CCTCCCTTTG GAGCAAGTAC CGGCAACTTA GAGGCTTATT TGAAAGATCT TCCCTCTACC 
CGCTTTGTAG CTGAGAATGA AGATTCTGTG ATTATGAAAT TTGGCGCCTC TTACTACTTC 
CGCTCCAACG ATATCAACTG GAATTTATTT GATACCGGAA ATTAA
 
Protein sequence
MGLWAFYFLI KIILFYTGYI NFHFFVNLAF ALALIFSHAR PRLLQIKRWV AIPIGIILFY 
FDSPLPPLRN IIAKLDQLLG FSFNYYIELL GRILDWRILV ALAVSFVIYY ALSKKIRMTT 
IAMLAIFSVL LPFHSNSSMQ AYDSDGQVIG IPSDAVLTES LDGFFVEESG RTGFNRSQKA 
SGQAFDILVI NVCSLAWDDL KYVKEEDNPL FKRFHYLFTS FNSASSYSGP SIIRLLRASR 
GQQDQRDLYK KPVEDSLLFN NLKTAGFQTQ FALNHDGKYG DLLQEIRTDG GLSAPLFDNK 
QATPYLRAFD GSQVYEDYSV LSNWWDARMK LPAERVALFY NTITLHDGNR ALDGARLENS 
VETYSRRLHK LLEDVDRFYT KVNNSGRQVV IVFIPEHGAA IRRNKNEIVG MREIPSPNVT 
NIPVGIMLTN KSDSPFKTNR IDQPTSYLAT SELISKFVAK PPFGASTGNL EAYLKDLPST 
RFVAENEDSV IMKFGASYYF RSNDINWNLF DTGN