Gene Pnuc_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1167 
Symbol 
ID5052594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1221945 
End bp1222958 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content45% 
IMG OID640471339 
Productcellulase 
Protein accessionYP_001155947 
Protein GI145589350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.314141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTT CCCCATTACT TCGATCTTGG CTTGTGACTA TAGCCCTTGG GGTAATCTCC 
AGTAATGCAA TTTGTGCAGA TCAAGATTGG CAACAGTTTA AAAATGCGTA CATCCAGAAT 
GGCCGAGTAA TTGATAGCGG TCAGGATGGA ATGAGTCATA CCGAGGGTCA AGGAGTAGCA 
ATGCTCCTTG CGGTTAAAAA TAATGATCCC CAAACATTTG AACTCGTCTG GAATTGGACG 
CAGCACAATC TTCAAGTTCG AGAAGATAAG TTACTCGCCT GGAGCTGGTC CCCCACTCAA 
GGTGTGATGG ATACTAATAA TGCAAGTGAT GGTGATCTAT TTATCGCCTG GGCCCTCTCT 
CAAGCCTATA CGCGTTGGCA AGAACCACGC TACCTTTTTT ATGCCTTACA AATTAGTCAA 
TCAATTCGTG AAAAACTCAT ACGTAAAACG AACTTTGGTA CGGTCATTCT TCCAGGAGCA 
TTTGGCTTTG AAAAACCAGA AGGCCTCAAG CTCAATCTGT CGTACTGGGT TTTTCCTGCA 
ATTACCGAGT TAGCCGTTCT CGATCCAGCG CCAGAATGGA ATGAGCTTCA ATTGACTGGA 
CTGCGCTTAC TTGAGCAAGC GCAATATGGA AAATGGAAGT TGCCGCCTGA TTGGCTAATG 
TATAAGGATG GCATTAGCAC TCCAACCGAT GGAAACCGCT TTGGCTACGA TGCAGTCCGT 
ATCCCCTTGT ATCTTATTTG GGGGAATCAG GCTGGCAACT CGAATATGAA GCCTTTTCAA 
TCTTTTTGGA GCTCATTTCA GGGGCAAGAA TTCCTACCGG CCTGGGTTGA CCTTAAGACC 
GGGGATATCG GAACGTACAA TGCATCATTG GGCTTTCACA GTATCGCTGC CCTCACCCTT 
TCCTACCCTC AGATTGATTT AGCCCAACTC CCGAACTTTG ATCCTACAGA AGGCTATTAC 
TCCTCCATGC TCTATCTATT TACAAAGTCT GCTGTCGAGG ATCTAAAAAA ATAA
 
Protein sequence
MTFSPLLRSW LVTIALGVIS SNAICADQDW QQFKNAYIQN GRVIDSGQDG MSHTEGQGVA 
MLLAVKNNDP QTFELVWNWT QHNLQVREDK LLAWSWSPTQ GVMDTNNASD GDLFIAWALS 
QAYTRWQEPR YLFYALQISQ SIREKLIRKT NFGTVILPGA FGFEKPEGLK LNLSYWVFPA 
ITELAVLDPA PEWNELQLTG LRLLEQAQYG KWKLPPDWLM YKDGISTPTD GNRFGYDAVR 
IPLYLIWGNQ AGNSNMKPFQ SFWSSFQGQE FLPAWVDLKT GDIGTYNASL GFHSIAALTL 
SYPQIDLAQL PNFDPTEGYY SSMLYLFTKS AVEDLKK