| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1165 |
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| Symbol | |
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| ID | 5052159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1218966 |
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| End bp | 1220519 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471337 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001155945 |
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| Protein GI | 145589348 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTA GCTTCGAAGC AGACTCTAAT GTTCGGCGCA ACTCCCGCCT TATCCTGGGA
GCATCGATTG TTCTAGCCAT CATATTCGTG ATTAATGCGG TAATTTCAGG ATATCTACTG
CGCCGAAATA CGATGGAGGA TCGCGCTGAT CAGCTAGCGA CCTTAACATT AATTTTGGCT
GAGCATACCT CTCAAATTAT TTTTTCGGCT AATACCGTTC TGAAAAGTAT TGATGATGTC
GTCGTGGTAG CAAAAATTGA TAATGAGAAA AGCTACCGAG AGTTTGCCTC CAATAAGAAA
CAATTCGAAC TGCTTGAAGA AAAGACTAAA TCCAACCCCA TATTGGATGT CACCACCTTT
GTAGGGGACG ATGGCAAGGT ACTGAATTTT TCTAGATCCT ATCCAGCACC AGAAATTAAT
TTAGCGGATC GGGATTATTT TATTTATCTA AAAGATCACA ATAGCCCTGA TACGTTTTAT
AGCGTTCCCG TAAGAAATAA GGGAAATGGC AAGTGGATGT TTTATTTGGC TCGTAGAGTG
AATGGCAAAC ATAACGAGTT CTTAGGCTTG ATATTGGTTG GTGTTTCAGT AGAGGTATTC
TCCACGCTAT ATGAGCGAAT TGGAGAAAAT CTAGGTAATG GCTCATCCAT TACCTTGTAC
CGAGGTGACA AAACACTGTT GACCCGCTGG CCTTTTGCTG ACGATTTGAT AGGTAAGGTC
AATACCAATA CTCTAATTGA GCAATCATTG GCTGAAGGGG AAAATTCTAA TGGGGTGATC
TTTACGGATT CCACTGGCTT TACGAGGCAA AATACAGCCC CTGTTCCGAG AGTGATCTCC
TATCGTCGGG TGACTGATTT CCCTTTTATA GTCGGCGCTG TTGTCCCTGA AACTTTATAT
CTTTCCAAAT GGTACAAGAA TGGCTCAGGA GGTCTAGTTG CTAGCGCTCT TAGTATCCTG
GTTTTATTTA TCGGAACGTA TTTCCTGCTG ACTACTTATC GTCGGAATGC AGAAAATGAA
TATCATGCTC ACCATGATGT TTTAACGAAG TTGCCTAATC GCACATTATT TTCAGATCGA
CTGTCCAATG CTATTGCAGC GTGCAAGCGT AATCAAGAGG CCTTGGCCAT TCTGTTTATC
GACCTAGATA ACCTCAAAAC GATTAATGAT ATCCATGGGC ATACCGCCGG TGATTTGGTG
TTGACCGAGG TGTCTGCCAG AATGCGCCAA TGTTTGCGTG ATTCTGATAC CGTCGCTCGT
ATCGGCGGTG ACGAGTTTGT AGTCCTTCTT CCTGGTGTTG GTACCGAAGA GACTGCGGTG
ATGCTGGCTG AAAAAATTCG TACGGCACTT ATCCTGCCAA TAGACCTAGG TGGAAGCGCT
ATCACTACAA GCGCAAGTAT TGGTGTGGCT TTATATCCCG CTCATGGTTT AAACGATGCT
GATTTGATGA ATAGTGCGGA TGTGGCTATG TATGAGGCTA AATCTAGTGG CCGTAATGCA
ATCAAGGTCT ATGGTAAAGA TTTGGTAGCC AATATCTTTC GGGACATTTC TTGA
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| Protein sequence | MTISFEADSN VRRNSRLILG ASIVLAIIFV INAVISGYLL RRNTMEDRAD QLATLTLILA
EHTSQIIFSA NTVLKSIDDV VVVAKIDNEK SYREFASNKK QFELLEEKTK SNPILDVTTF
VGDDGKVLNF SRSYPAPEIN LADRDYFIYL KDHNSPDTFY SVPVRNKGNG KWMFYLARRV
NGKHNEFLGL ILVGVSVEVF STLYERIGEN LGNGSSITLY RGDKTLLTRW PFADDLIGKV
NTNTLIEQSL AEGENSNGVI FTDSTGFTRQ NTAPVPRVIS YRRVTDFPFI VGAVVPETLY
LSKWYKNGSG GLVASALSIL VLFIGTYFLL TTYRRNAENE YHAHHDVLTK LPNRTLFSDR
LSNAIAACKR NQEALAILFI DLDNLKTIND IHGHTAGDLV LTEVSARMRQ CLRDSDTVAR
IGGDEFVVLL PGVGTEETAV MLAEKIRTAL ILPIDLGGSA ITTSASIGVA LYPAHGLNDA
DLMNSADVAM YEAKSSGRNA IKVYGKDLVA NIFRDIS
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