Gene Pnuc_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1148 
Symbol 
ID5053931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1196749 
End bp1197522 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID640471319 
Producthypothetical protein 
Protein accessionYP_001155928 
Protein GI145589331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT ACCTCCACTC GCTGCCCAAT GTTGTCATTG GGTTATGCAT TATGTGTGTT 
GGACTTATCC TTTCCACTGG AATTCCTTTT TATATTCGCT GGAAATATGA TCTCAACCCA 
GACGAGCATT TGGCAAAAGG GGCAGAAGAA GGGTTCAAGC TGTTCACTTC TATTACGCTT 
TTATTAATTG CCTTTTCTTT AGTTCGTGTT CAAGGCGACC ATCGTAATGT CGAAGATTTA 
GTATCTAGAG AAGCTGCTTT GATGTTTAAA CTCAATCGCT CATTGGCAGC ATTTGGGGGT 
CCACAAGCTC AAGAGTTACA GGGTGATTTA AAAGATTATG CAACTGCCAT CGTTGACGAT 
GAGTGGCCAC TCATGGCCAA AGGCAAAAGA AGTGAAGAGG CATCAAATAC CTTGATTGAT 
CTTACGCAGG GAATTCGTTT ATTGGATCCC CGGAATCCCG TGCAGCAAAT GGCGAGGGCT 
GAAATAGTAA CGACCTTAAA TCAACTCTCA GACGTGAGGG AGGCGCGCCT ATCAGCGGTA 
AAACTTAAAT TGCCATCTTA TCTATGGCAG GCACTGACCG TTTCTGTCTT GCTACTGATC 
GTCTTCGGTT GGTTACAAAA CCCACTTCCG AAAATGGTAG CTTATGTCGG TGGCGTAACG 
ATAGGGGTTG CCTTATTGCT CACGCTAGTC ATTGCCTTGG AGGGTTTATT TGTGGGTGAA 
AGTCAAGTAA ACCCAGAAGC AATAGTTTCT ATCTTGCCGT CTTTGGGTGC TTAA
 
Protein sequence
MIEYLHSLPN VVIGLCIMCV GLILSTGIPF YIRWKYDLNP DEHLAKGAEE GFKLFTSITL 
LLIAFSLVRV QGDHRNVEDL VSREAALMFK LNRSLAAFGG PQAQELQGDL KDYATAIVDD 
EWPLMAKGKR SEEASNTLID LTQGIRLLDP RNPVQQMARA EIVTTLNQLS DVREARLSAV 
KLKLPSYLWQ ALTVSVLLLI VFGWLQNPLP KMVAYVGGVT IGVALLLTLV IALEGLFVGE 
SQVNPEAIVS ILPSLGA