| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1145 |
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| Symbol | |
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| ID | 5053223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1193916 |
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| End bp | 1195106 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471316 |
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| Product | TRAP-type uncharacterized transport system periplasmic component-like protein |
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| Protein accession | YP_001155925 |
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| Protein GI | 145589328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.97631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA TCCCGAACGA AATTGAAGAG TATGTATTTA AAGCTCTAGA CTGGATAAGA
GGTAAGCATC ACATCCGTAA AGGCTTGGCT CTACTATTAA TCGCGCTGCT GCTGGGTCTA
GCCGGAAAAT TTGCCTACGA TCTTTATCCT CGCCATTATG AGTTGACTAT CAGCGGTGGC
GGCATGCTAT CCAAGAGTCA TTATTTGACC AAGGTATTAC AGGCTGAAGC GGCTCAGCGC
AATATTTCAC TAACGATTGT GCCAATGGCC GGTTCATTCG AGGCTCTTAA TGAATTAAAT
GCTGGAAAAT TGGATCTAGC CTTTGTTCAA GGCGGTATCG ATCCTATGGG TTATGACAAT
GTTACCCAAG TTGCCTCGAT GCCCCCTCAG CTGATTCAAT TTTTAGTTAA GGATGATGTC
AAAACAATTC AGGATATTCG CGGCAAGCAA GTCAATCTGG GTGAAAAGAA TGGTGGCCCT
AGTATTGTCT CCAACCAAAT GCTGCGCTTT TCCGGCTTGG TGCCGGAAGT AGATTATGTA
GAGACAAATT TTAATGATGA AGAGCTATTG GGCATGAAGC CCGAAAAACT TCCGCAAGTC
ATTGTTCAAA TTTCGTATGC TCCTTCAGCG GTGGTTGATT TTTTAGTTCA AAAGAGGGGA
TATCAATTAC TTGAAATGCC ATTCCCGGCA TCATTGGCGA TGCGCATGGG CTGGGTGTCT
GATGCCAAAA TTTTGGCATA TATGTATCGA ATTGCCCCAC CGGTACCGGC TTCTGACATA
CATGTCATCG GCGTGAACCT GAATCTCTTG GCCAATAAAG AAGTGGATCC TCGCGCCATC
TCTAAGCTGC TAGAAGTTCT ATATAAACCC AAGATTGCAT CTATCGTAGC CATTCCAATT
TCAGAGGATA AGATCCTCAC CCCTTCAGGG TTCCCCATAT CCAATGGGAC TGATATGTAT
ATCGCTAGCA AGCAGCCTTT GATTACCTCG CAAATGATTG ATCAAATCAA AGGTTTGTTT
GGGCTGATTA TGACGCTCGC ATCCATTGCC CTCGTTGTAT TTAAGTGGTT TAAAGGTCCA
ACGGATGATG AGGAGGGTGA CGGTGAGGAT GGTGATAAGA AAAAGAGTGA CGCTCCTACT
GTGGGAGATC ATATGGATAA TCTTTCCAGC AGCATCTCCA AGCTCACGTA A
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| Protein sequence | MSDIPNEIEE YVFKALDWIR GKHHIRKGLA LLLIALLLGL AGKFAYDLYP RHYELTISGG
GMLSKSHYLT KVLQAEAAQR NISLTIVPMA GSFEALNELN AGKLDLAFVQ GGIDPMGYDN
VTQVASMPPQ LIQFLVKDDV KTIQDIRGKQ VNLGEKNGGP SIVSNQMLRF SGLVPEVDYV
ETNFNDEELL GMKPEKLPQV IVQISYAPSA VVDFLVQKRG YQLLEMPFPA SLAMRMGWVS
DAKILAYMYR IAPPVPASDI HVIGVNLNLL ANKEVDPRAI SKLLEVLYKP KIASIVAIPI
SEDKILTPSG FPISNGTDMY IASKQPLITS QMIDQIKGLF GLIMTLASIA LVVFKWFKGP
TDDEEGDGED GDKKKSDAPT VGDHMDNLSS SISKLT
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