| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1138 |
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| Symbol | |
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| ID | 5051913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1187083 |
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| End bp | 1189056 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471309 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001155918 |
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| Protein GI | 145589321 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAT TAATGCAAGA AAACCGCGTT TTTAACCCAC CTGCAGATTT TGTTAAGGGT
GCCACCATTC CAGGTATGGA AGCTTATAAC AAGCTATGTG CTGAGGCTGA TGCAGATTAT
GACGGTTTTT GGGGTCGTCT TGCAAAAGAA AATATTTACT GGAAAAAGCC TTTTACCAAG
GTTTTGGACG AATCAAAAGC GCCTTTCTAT AAATGGTTCG AAGATGGAAC TACAAATGCT
TCTTATAACT GCTTAGATCG CCAGGTAGAA AATGGTTTGG GCGATAAGGT CGCCATCATT
TTTGAAGCCG ACGATGGCAC AGTAACTAAA GTTACTTATA AAGAGATGTT GGAGCGCGTT
TGCAAAATGG CAAATGCACT TCGCAAGATG GGCATCAAGT CAGGTGACCG CGTCATTATT
TACATGGCGA TGACGATCGA AGGCATTGTT GCGATGCAAG CTTGTGCTCG TATTGGTGCA
ATTCACTCTG TAGTGTTTGG TGGCTTTTCT GCTCAAGCCT TGCGTGATCG TATTGTTGAC
GTGGGTGCAG TCGCAGTCAT TACTGCTGAC GGACAATTCC GCGGTGGCAA ATCATTGCCA
TTAAAAGCCA TCTGTGATGA GGCGCTCTCC ACTGGCGAGT GCGGCAATGT AAAACATGTC
ATCGTCAGCA AGCGTACTGG CACTGAAGTC ACCATGACAG CTGGCCGCGA TGTTTGGATG
CAAGAAATTG TGGCTAATGA GCCTGCAACT TGCGAGCCAG AGTGGGTAAG CGCAGAGCAT
CCACTATTTA TTCTGTATAC ATCCGGTTCA ACCGGCAAGC CAAAGGGCGT ACAACACTCA
ACAGGCGGCT ACTTATTGTG GGCAATTCTC ACAATGAAGT GGACTTTTGA TATCAAACCA
AATGATGTGT TCTGGTGTAC TGCCGATATC GGTTGGGTAA CTGGCCACTC TTATATTACT
TATGGCCCAC TCGCAGTAGG CGCCACAGAG ATCGTGTTTG AAGGCGTGCC AACTTATCCA
AATGCCGGCC GTTTCTGGGA TATGATCCAA AAACATAAGG CAAGTATTTT CTATACAGCA
CCAACAGCGA TTCGCTCTTT GATTAAAGCA TCTAGCAATG ACGAGTCAAT ACATCCAAAG
AGCTATGACT TATCTTCATT GCGTCTCTTG GGTTCAGTAG GTGAGCCAAT CAATCCTGAA
GCATGGATGT GGTATTACGA AAATGTAGGC AGCTCACGTT GCCCAATCGC CGATACATTC
TGGCAAACAG AAACTGGTGG TCATATGATT TCACCATTGC CAGGCGCAAC CCCAATGATT
CCTGGTTCAT GCACATTGCC ACTACCAGGT ATTAAGGCGG CGATTGTGGA TGAGGCTGGT
GTAGATGTAC CAAATGGTCA AGGCGGTATC TTGGTTGTGA AGCGTCCATG GCCATCAATG
ATTCGTACGA TTTGGAATGA TCCGGACCGT TTTGTTAAAT CCTATTTCCC AGAAGAGTTG
GGCGGTACTT TGTATCTGGC AGGTGACGGC GCGATTCGCA ATAAAGATAC AGGCTACTTC
ACTATTACTG GTCGTATCGA TGACGTATTG AACGTTTCTG GTCACCGTAT GGGCACGATG
GAAATTGAAT CATGCTTGGT AGCGAATCCA TTGGTTGCTG AAGCGGCAGT AGTTGGCCGC
CCTGACGATA TGACTGGTGA AGCCATTTGC GTATTCGTAG TTCTTAAAGG TGGTCGCCCA
ACAGGTGATG AAGCCAAGAA GATTGCTACT GAATTGCGTA ATTGGGTAGG GAAAGAGATC
GGACCGATCG CCAAACCGAA GGATGTGCGT TTTGGCGATA ACTTGCCTAA AACTCGCTCT
GGCAAGATCA TGCGCCGCTT GCTGCGTGTG ATTGCTAAAG GTGAAGAGGT TACTCAAGAT
ACCTCAACCC TTGAAAATCC AGCGATTTTG GACCAACTCA AAGAGTCTCT CTAA
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| Protein sequence | MEPLMQENRV FNPPADFVKG ATIPGMEAYN KLCAEADADY DGFWGRLAKE NIYWKKPFTK
VLDESKAPFY KWFEDGTTNA SYNCLDRQVE NGLGDKVAII FEADDGTVTK VTYKEMLERV
CKMANALRKM GIKSGDRVII YMAMTIEGIV AMQACARIGA IHSVVFGGFS AQALRDRIVD
VGAVAVITAD GQFRGGKSLP LKAICDEALS TGECGNVKHV IVSKRTGTEV TMTAGRDVWM
QEIVANEPAT CEPEWVSAEH PLFILYTSGS TGKPKGVQHS TGGYLLWAIL TMKWTFDIKP
NDVFWCTADI GWVTGHSYIT YGPLAVGATE IVFEGVPTYP NAGRFWDMIQ KHKASIFYTA
PTAIRSLIKA SSNDESIHPK SYDLSSLRLL GSVGEPINPE AWMWYYENVG SSRCPIADTF
WQTETGGHMI SPLPGATPMI PGSCTLPLPG IKAAIVDEAG VDVPNGQGGI LVVKRPWPSM
IRTIWNDPDR FVKSYFPEEL GGTLYLAGDG AIRNKDTGYF TITGRIDDVL NVSGHRMGTM
EIESCLVANP LVAEAAVVGR PDDMTGEAIC VFVVLKGGRP TGDEAKKIAT ELRNWVGKEI
GPIAKPKDVR FGDNLPKTRS GKIMRRLLRV IAKGEEVTQD TSTLENPAIL DQLKESL
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