Gene Pnuc_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1112 
Symbol 
ID5052948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1158794 
End bp1159387 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID640471282 
Producthypothetical protein 
Protein accessionYP_001155892 
Protein GI145589295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.58426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CCCCAAAATA CCTATTCACC ACCATTTTCT GCCTGCAGGC CCTACTTTTT 
AATAACTATG TTCAAGCCCA AAATCAAGAT GGCTTTGTGG ACCTCATTGA TGGTGTCAGC 
CTCACTGACT GGAACATCAT CGGTACTGCC AATTGGGTCA TTGGTAACGG CATTGTTGAA 
GGCAATAAAC CCAATGGATT TTTGGTTTCT ACCAAGCCAT ATAAAAACTT CATTATTAGG 
ACTGAGTTTT GGGCAGAATC CAATACCAAT AGCGGTATCT TTATTCGCTG CCAAGATCCC 
AAAAAAGTTA CTCAAAGTAC CTGTTATGAA ATCAATATTT GGGATACGCG TCCTGAGCAA 
GCGTATGCAA CTGGTGCGAT TGTGGATGTG GCTAAAGTAG ATCCAGTGCC AAAGGCTGGT 
GGTCGCTGGA ATACGATGGA AATTACTGCC AATGGCTCAC ACTTTAAAGT TGTGCTAAAT 
GGCGTTACCA CTGTTGCTGA TGGGCAGGAT AGCCGCTATG TAGAAGGCCC GATTGCCCTG 
CAATCAGCCG GGGGAATTAT CAAGTTTAAG AAGGTGCAGA TTAAAACGCT TTGA
 
Protein sequence
MKIAPKYLFT TIFCLQALLF NNYVQAQNQD GFVDLIDGVS LTDWNIIGTA NWVIGNGIVE 
GNKPNGFLVS TKPYKNFIIR TEFWAESNTN SGIFIRCQDP KKVTQSTCYE INIWDTRPEQ 
AYATGAIVDV AKVDPVPKAG GRWNTMEITA NGSHFKVVLN GVTTVADGQD SRYVEGPIAL 
QSAGGIIKFK KVQIKTL