Gene Pnuc_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1097 
Symbol 
ID5051993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1139797 
End bp1141014 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content44% 
IMG OID640471267 
Producthypothetical protein 
Protein accessionYP_001155877 
Protein GI145589280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTC ACATCCATCT TCTACACAAT AGCCTTAGCA GCTTTCATAG CCATCCATAT 
GGGGAAGCTA TAGCCTATAT AGAGGCTCTC AAGGCCATGG GGGGCACCGC TACTATTTAT 
GCAAATACTG CTTGCGACAG TCGAATCCTC CATGATTTAA AAGCCCTACC CATATTTCCA 
TGTGCCACTG ACTCCATGGT GGATACAAAT CCAAGCAGCG CCGAGCAATC GGAGTTTGTG 
AGCCTTGGAA ATGCATTTGG TTCAGCACTA GCCAACCACC TTCCGAAAGA ATTTACCCCG 
GAAGAAATTA TTTATATTCC TTATGCTAGA CAAAATGAGG CCCATGGAGT TGCCTTATGG 
TTAAAAACCA TTCCGGCAGA TAAGCGCCCA AAAATTGTTT TATTTTGTTA TAGGCCAGAA 
TTTAGATGGT CCCTCAACGA TGATCGAACA CGTTTTGAAG GAAACTTTAC TTACTGGAGA 
GCGGTTGGAA GTGAGCTTAT TGAGCAACTT GATTCCAAAA ATATCTTACT AGCTAGTACT 
GATCATCGTT TGAGCGCAGC ACTCCAAGCA GCCTCTGGAA TAAAGGCATT AACAGTAAAG 
ATGCCAACAC TCTACCCACT CGATCCCGCT ATCTTATTGG CGCAAACGAG AGATATTGAT 
GTTGGCCTAT TAGGAACATA CCGACCCGAA AGAGGAAGTC AATTTTTAAT TAACATCATC 
AAGCTTGTCG ACACCAGACA TCCTGGATTG CGCTACCTAG TCCAAGTCCA GAACTCCTCA 
GACTTCGAAC AACTAAAGAC AACCCTCAAT GCCCTGCGTT TCCAGGGAAA TTTAGAGGTG 
TTAATTGGCA ATCCCGATCA AACAGAATAT ATGCAGCATC TTTCACGGTG TATGCTCTCT 
TGCCTTCCTT ATGCCCCTGC TAGATATGCC ACCCGCTCAT CCGGGGTTCT ATCTGAATGC 
GCAGCTTACG GGATTTCCAT GGTGATTCCA GCCAATACCT GGCTATCCGA TCGTTTGGAT 
GCCGGGGAAA TAAGTGCCCT CAAATTTGAA TATTGGACCC CTGAGGCAAT CGCCACATGC 
ATTGAAATAG CCTTAAGCAA TATTGGCCCA ATGACTGAAC GAGCAAAATA TCTCTCGCAT 
GCTTGGAGAA AGCAAAACAA TGCGCAAAGA GTACTTGAAG ATATTTTTTC CGAGCTAAAA 
CTGGGTTTAG AAAAATAA
 
Protein sequence
MAVHIHLLHN SLSSFHSHPY GEAIAYIEAL KAMGGTATIY ANTACDSRIL HDLKALPIFP 
CATDSMVDTN PSSAEQSEFV SLGNAFGSAL ANHLPKEFTP EEIIYIPYAR QNEAHGVALW 
LKTIPADKRP KIVLFCYRPE FRWSLNDDRT RFEGNFTYWR AVGSELIEQL DSKNILLAST 
DHRLSAALQA ASGIKALTVK MPTLYPLDPA ILLAQTRDID VGLLGTYRPE RGSQFLINII 
KLVDTRHPGL RYLVQVQNSS DFEQLKTTLN ALRFQGNLEV LIGNPDQTEY MQHLSRCMLS 
CLPYAPARYA TRSSGVLSEC AAYGISMVIP ANTWLSDRLD AGEISALKFE YWTPEAIATC 
IEIALSNIGP MTERAKYLSH AWRKQNNAQR VLEDIFSELK LGLEK