| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1094 |
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| Symbol | |
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| ID | 5054006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1100933 |
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| End bp | 1102648 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471264 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001155874 |
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| Protein GI | 145589277 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATGTA CTTGGTCGTA TCAAGTATTC GGACAGGTCG ATGCTGGAGC GCTGCAACAG
GGTCTTGAGC AGCAATTACC ATTGCCATCC CCTTTGGCTT TGCCTGAGCC TAGTAAAGCT
GCGCCAGTTC AGCCTAGCGC TCCCAAACAA GGGGAAGTGC GTTTCACGGT CAAGTCATTT
GTACTGGAGG GTGTCAATAT TCTTCCTGAG TCTGAAGTGC AGTTAGCGAT TCGTTCTTGG
GTTGGGGTGC CAGTTAGCTT TGATGATCTG CAAAGAGCAT GTGATGCCAT TCAAAATTTA
TATCGCAGTA AGGGTTACAC GGTTCAGGCA ATATTGCCAC CACAAAAGAT TGCGGATGGC
ATTGTAAAAA TATTAGTTAC CGAAGCAAAG TTGGGAAAAG TGGTCGTAGA AAATCCTAAA
GGACCAACTC GCTTCAGTAA AGAACGAGCA GCAAGCTACA TTACTTATGC CAATCCCATT
GGTGCTCCAT TGAGCATGCC TGCGATTGAG CGAGCTGTAA CCATCTTGAA TGAAACACCC
GGCGTTATCG TTCTGAGCCA ATTAGAACCT GGTGATAAGG ACGGTGAGTC AGATTTACGC
CTCCAATTAA CTCAGCCCGA TCTCGTGCAA GGACGTGTTG AAGCCAATAC CTATGGCAGT
AGAACAACAG GCGCGAATCA GGGTATTGTC GCCTTAAATC TGAATAACCC CATTGGTATT
GGCGAATCTT TTTCTTTAAA TGGAATCGTG TCGCAAGGCT CGCAATATAT TCAGGGGGCG
ATTTCCGCAC CAGCCTCACC TGATGGCTTG CGTTTAGGTC TTGCAGGTAC CTTCCTAAAT
TATAAGAATG TTAGTAACTA TGCCTATAAC GGTGGTGCAG GCTCGGCCTG GACAACCGGT
GTTAGTGGTG CATATCCTTT GATCCGAAGC CCAGGAGCTA ACCTAAATGG ATCTGTTAAC
TACGATATCA AGAGCTATAA CAATACAAAT TTCATCACTG ATAGCGTTAT TAGTGCCTAC
AACATCAATA ATCTCTCTGC GGGGCTATCC GGAAATCTAG CTGATGACAT TGGGTATGGC
GCCATCAATA CTGGTTCTGT AACCATGGTT CTAGGGCACC TCGATATTCA GGCGACTAGC
CAATCTGGTT ATGGACTGTA CGCAATTCCG GACACAACTC CCACAGCTTA TGGAGTTGTG
ACCCCATCTA ATTTTGCCAA GTTAGCATTC TCGGCTAATC GTACTCAGCA ACTAGATCAA
AGTGGTAATA CGAATTTATA TGCCGGTGTG TCTGGTCAAT TTGCATCAGT CAATTTAAAT
ACGGCGGAAC AAATTTACCT TGGCGGTCCT TATGGAGTTC GTGCATATCC GGTAGCACAA
TCAGGGGGCA CTCAAGGTGG ATTATTCACT GTTGAACTGA GGCATCGTAT TTATGAAAAG
TTTACTTTGT CTACCTTCTT TGATGGTGGT GTAGTTCAGC AATATAAAAA TTTATATCCA
GGTTGGCAGG GTCAAACTAA TGCCAACAAT ACTTACTCTT TAATGGGGGC TGGTTTTGGT
GTGAAGTGGG ATTACGAAGG GTGGGGTATC AATGCGATGG TTGCATGGAA GGTTGGTCAA
AACCCACTTT ATAGTTCTAC AGGACAGGCG GTTAATACGG ATGGAACAAC CACTCAACCT
AGGGGTTGGG TAAGTGCAAG TTATAACTTT AATTAA
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| Protein sequence | MTCTWSYQVF GQVDAGALQQ GLEQQLPLPS PLALPEPSKA APVQPSAPKQ GEVRFTVKSF
VLEGVNILPE SEVQLAIRSW VGVPVSFDDL QRACDAIQNL YRSKGYTVQA ILPPQKIADG
IVKILVTEAK LGKVVVENPK GPTRFSKERA ASYITYANPI GAPLSMPAIE RAVTILNETP
GVIVLSQLEP GDKDGESDLR LQLTQPDLVQ GRVEANTYGS RTTGANQGIV ALNLNNPIGI
GESFSLNGIV SQGSQYIQGA ISAPASPDGL RLGLAGTFLN YKNVSNYAYN GGAGSAWTTG
VSGAYPLIRS PGANLNGSVN YDIKSYNNTN FITDSVISAY NINNLSAGLS GNLADDIGYG
AINTGSVTMV LGHLDIQATS QSGYGLYAIP DTTPTAYGVV TPSNFAKLAF SANRTQQLDQ
SGNTNLYAGV SGQFASVNLN TAEQIYLGGP YGVRAYPVAQ SGGTQGGLFT VELRHRIYEK
FTLSTFFDGG VVQQYKNLYP GWQGQTNANN TYSLMGAGFG VKWDYEGWGI NAMVAWKVGQ
NPLYSSTGQA VNTDGTTTQP RGWVSASYNF N
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