| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1086 |
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| Symbol | |
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| ID | 5052927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1091099 |
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| End bp | 1092334 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471255 |
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| Product | patatin |
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| Protein accession | YP_001155866 |
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| Protein GI | 145589269 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.477256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTC AAATCATGCG CTCACTCTTA GCTTCGTGCC TTACCTTAAT CCTTCTACTT
TGTGGATGTT CTGGCTTAGA GCGAAAAGCA GCCGTTCCAG CTCAATCCTT AAGCAAGGCT
CATATTGCAG GCTTACCGAG TGTTCGCTAC CTTGTCTCCA CTCAAACTGG AGTCGATGCC
CTGGTTCAAG ATGTTGTCGC GCTGGAATCA TCTCGTGGGA AAAATGCTTT TGATGGCGAC
GCCAATTACC TAGCCCTTTC TGGAGGTGGT GATGACGGTG CCTTTGGAGC TGGTCTCTTG
GTTGGCTGGA CCCAACAGGG CTCTAGACCG ACATTTAATT TAGTTACCGG AATTAGTACT
GGCGCACTGA TTGCTCCTTT TGCCTACCTT GGTAAAGAAT ATGACCCAAT ATTGAAAGAG
GTTTACACCA GCATCAAACC AACTGATGTG TATATAGAGC GCGGCATTCT ATCCGGCATC
ATTAGCGATG GTCTTGCAGA CTCCACCCCA CTCTATACAT TGATCTCAAA ATACGTTGAT
GCCAATTTTC TGAAAAAAAT TGCCTATGAA TACACAACGA ATGGCCGCTG GCTCTTAGTT
GGCACTACCA ATATTGATGC GGGTCAGCCC ATTATTTGGA ATATGGGGCG TATTGCCAGT
ATTGGCACTC CAGAAGCTCT TGAGCTGTTT AGACGCATCA TGCTGGCCTC AGCATCTATT
CCAGGCGCAT TCCCACCCGT CATGTTTGAT TTCTTGGTAG ATGAGCAAGT ATTTCAAGAG
ATGCATGTTG ATGGTGGTGC GAGCACCCAA GTCTTTTTGT ACCCTGCTGC TGCAGCCGTA
AAAGCAAACG AATTAGGCAT TAAGCGCCGC GCTAAACGCC AGGTGTACAT TATCCGCAAC
TCGCGTTTAG ATCCCCGCTG GAATGAAACA GAACGCCGCA CCCTGAGTGT TGCAGGCAGA
GCAATCTCAC AACTCATACA AACTCAAGGG ATTGGCGATC TCTACCGTAT CTACAACACG
GCGCAAAGCG ATAACGTCGG CTTCAATCTT GCATATATTG GTTCAGACTT TAATGAGCCT
CATACTGAAG AATTTGACAC GAAGTATATG AATGCTCTCT ATCAATATGG CTACGAACAC
GCTATTAAGG GCTACCCTTG GAGCAAATAT CCGCCAGGAT TTAAAGGTGC CTATGATGCC
GATGGAGAAA AGATGCAGAT GAAAAAAATT CAATAG
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| Protein sequence | MSSQIMRSLL ASCLTLILLL CGCSGLERKA AVPAQSLSKA HIAGLPSVRY LVSTQTGVDA
LVQDVVALES SRGKNAFDGD ANYLALSGGG DDGAFGAGLL VGWTQQGSRP TFNLVTGIST
GALIAPFAYL GKEYDPILKE VYTSIKPTDV YIERGILSGI ISDGLADSTP LYTLISKYVD
ANFLKKIAYE YTTNGRWLLV GTTNIDAGQP IIWNMGRIAS IGTPEALELF RRIMLASASI
PGAFPPVMFD FLVDEQVFQE MHVDGGASTQ VFLYPAAAAV KANELGIKRR AKRQVYIIRN
SRLDPRWNET ERRTLSVAGR AISQLIQTQG IGDLYRIYNT AQSDNVGFNL AYIGSDFNEP
HTEEFDTKYM NALYQYGYEH AIKGYPWSKY PPGFKGAYDA DGEKMQMKKI Q
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