| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1084 |
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| Symbol | |
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| ID | 5052313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1087337 |
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| End bp | 1089442 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471253 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001155864 |
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| Protein GI | 145589267 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0107991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA CTATTTCTAA AATGGCTTTT GCGGTTTCAT TGATGGCTAG TAGCTTTGCT
TTTGCTGCCG GTGGCGGGGG CGTAGTAGTT GATCCTGGCG CAATGGAGGG AAAGCACTTT
GATCCTAAGG GGCAGGCCCC ATCGAGCTAC ACCGTTGATC TACAGAATAA TTTGCGCAAG
ACTCTCCCGT TTGAAGATAA GCGCGACTTT GAAGAATCTA AAAAGGGATT TATTGCTGCC
CCAACATATA AGTCCATCAT GGCCGATGCT GGGAATGTTG CATGGGATAT GGGTAGTTAT
GATTTTCTGC TTCAAGGTAA AGACTTTGAT AGCGTTCATC CATCCTTGCA GCGCCAAGCG
ATTCTCAATA TGGGATACGG GCTGTACGAA GTTGTCCCCG AGAAAATCTA TCAAGTGCGT
GGGTTTGACT TAGCCAATAT TAGCTTCATC AAAACAAACA CAGGTTGGAT CGTCTTTGAT
CCATTGACTG CGAAAGAGAC AGCTCGGGCT GCCTTAGAGT TAGTCAATGA AAAATTAGGT
AAGCGCCCTG TGGTTGCGGT GGTGTATTCC CATTCTCACG GGGATCACTT TGGCGGTGTT
CGTGGTGTAG TGGATGAGGC AGACGTGAAA AGCGGCAAAG TCAAAGTCAT AGCCCCGGTA
GGCTTTATGG ATCATGCCGT TGCTGAGAAT GTCTATGCCG GTAATGCAAT GACGCGTCGG
ATGTACTTTC AGTACGGCGT TTTATTACCC CGGAGCCCCT TTGGGCATGT GGACCAAGCG
ATTGGCAAGA ATACCGCTGC AGGAAGCTTG GGATTAATTG AGCCCAATGT ATACATCACT
CAACCATTTG AAACCATGAC GGTAGATGGG GTGGAAATGG AGTTCCAAAA TACGCCTGGC
ACTGAGGCGC CTGCGGAAAT GAATACCTAC TTCCCGCAAT TTAAAGCATT TTGGGCTGCT
GAAAATATCA CGGCAACGAT TCATAACATC TATACCTTAC GAGGCGCATT AGTGCGCGAC
TCATTGGCTT GGTCTAAAAA TATTAACAAC GCTTTATATC GGTATGGCAC TCAGAGTGAA
GTGATGTTTG CTTCGCATAG CTGGCCACGT TGGGGTAACG AACGCATTCA GGAGGTGATG
CGTACACAAC GTGATAGTTA TGCTCATTTG CACAATGAAG TGTTGCACTT GGCAAACAAT
GGCGTCACCA TTAATGAAAT TCAGAATGTC TATAAGCAAC CAGAGAGTTT AAAAACCCAG
TGGGCTGCTC ATAGCTATCA TGGTTCTGAG GAACACAATA GCCGCGCCGT AATCAACCGC
TATCTAGGTT ATTGGGATGC CAATCCGGCA ACCCTGGCGC CCCTATCACC AAGAGATTCT
GCTCCTTTGT ACGTTGAAAT GATGGGTGGT TCGTCAAAGA TCTTGGCGAA AGGACGACAG
CTTTATAAAC AAGGTAAATA TCGCGAGGCG ATGGAGATTG TCAATAAATT GGTTTACGCT
CAACCCGACA ATACTGCAGC CAAAGATTTA CTTGCAGATA TCTTTGAGCA AATTGGCTAC
CAAAAAGAGA GCGCAAGCAT GCGTAATAGT TTTTTAGGGG CGGCGTATGA GTTGCGTCAT
GGAATGCCAT CAGGAGCCTC TCCAAAATCC AATGGACCTG ACATGATCAA GGCGATGACT
ACCGAGTTAT GGCTTAACTC ACTAGCAATT AGTATGGACA GTAAAAAAGC TACTGGCATG
AATTTCGTTA TCAATCTCGA TACGCCTGAT AACGGCGAAA AATTTGTAAT TGAGATGAGT
AACTCGACCT TAACGAATAT CAAAGGTCAG CAAGCCAAGG ATCCAACACT AACGATTACT
CTGAATCGCA GTGATTTAGA GCAAGTCATG GGCGGTCAAA CTACATTCGA CAGGCTTTTG
GCTGAAGGCA AAGTGAAGTT TGTTGGCGAC CGTAAGGCCT TTGATCAACT GAAAGGTACC
TTAACTGTCT TTAAGCCAGA CTTTGAGCTC ATGCCAGGCA CCAAACCTAA GACTGCGCCT
CAAGTTCAGA AAACAACTCG CGATCCATTT GAAGCGCAAG AGTTGGCCAT TACTGCGGGT
GAGTAG
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| Protein sequence | MNFTISKMAF AVSLMASSFA FAAGGGGVVV DPGAMEGKHF DPKGQAPSSY TVDLQNNLRK
TLPFEDKRDF EESKKGFIAA PTYKSIMADA GNVAWDMGSY DFLLQGKDFD SVHPSLQRQA
ILNMGYGLYE VVPEKIYQVR GFDLANISFI KTNTGWIVFD PLTAKETARA ALELVNEKLG
KRPVVAVVYS HSHGDHFGGV RGVVDEADVK SGKVKVIAPV GFMDHAVAEN VYAGNAMTRR
MYFQYGVLLP RSPFGHVDQA IGKNTAAGSL GLIEPNVYIT QPFETMTVDG VEMEFQNTPG
TEAPAEMNTY FPQFKAFWAA ENITATIHNI YTLRGALVRD SLAWSKNINN ALYRYGTQSE
VMFASHSWPR WGNERIQEVM RTQRDSYAHL HNEVLHLANN GVTINEIQNV YKQPESLKTQ
WAAHSYHGSE EHNSRAVINR YLGYWDANPA TLAPLSPRDS APLYVEMMGG SSKILAKGRQ
LYKQGKYREA MEIVNKLVYA QPDNTAAKDL LADIFEQIGY QKESASMRNS FLGAAYELRH
GMPSGASPKS NGPDMIKAMT TELWLNSLAI SMDSKKATGM NFVINLDTPD NGEKFVIEMS
NSTLTNIKGQ QAKDPTLTIT LNRSDLEQVM GGQTTFDRLL AEGKVKFVGD RKAFDQLKGT
LTVFKPDFEL MPGTKPKTAP QVQKTTRDPF EAQELAITAG E
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