| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1082 |
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| Symbol | |
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| ID | 5053872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1085036 |
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| End bp | 1086214 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471251 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001155862 |
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| Protein GI | 145589265 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTAATC CAGTTACTCT TAGCGCGTTA CCGCCGTTAG CGCTTTACAT CCACTTTCCC
TGGTGTGAAA AGAAATGTCC TTATTGCGAT TTTAATTCCC ATCAAATTAA GGATGCCAAA
AGCAGTACCA ATGGGTTTGA TGAGCCGCGC TATATCAAAG CCTTGATTGC AGATCTAGAA
ACAGAGCTTC CTAATATTTG GGGGCGACAA GTCCATAGCG TTTTTATCGG CGGTGGCACC
CCTAGCCTGC TCTCACCAGA AGGTATGGAT CAATTGCTTT CAGCGGTTCG TGCGCGCATT
AATCTGGAGC CTGATGCTGA AATCACTATG GAGGCCAATC CTGGATCAGT TGAGGCTGAA
AAATTTGCTG CGTTTGCCAA AAGCGGGATT AATCGCGTAT CCCTAGGTAT TCAGAGCTTC
CAAGATGAAC AACTTAAGGC TCTAGGTCGC ATTCACAATG GCGCGGAAGC TAAGCGTGCA
GTGCAAATTG CCTTAGATCA CTTCAAATCA GTCAATATCG ATTTGATGTA TGGCCTACCA
AATCAAAACC TGGATTCTGC CAAGACTGAT ATTGAAACAG CCCTCTCTTT TAATACGCCC
CACCTTTCTT TATATAACCT CACCTTAGAG CCCAATACTT ACTTTGCAAA TTTTCCACCC
AAGCTTCCGA ACGAGGAAGT GATTGATGCG ATGTTTGATC AAAATGTAGA TCTACTGTCT
AAAGCAGGCT ATCGGCGTTA TGAAATATCG GCTTATGCCA AGAAAGATCA AGAGTGCAAA
CACAATCTGA ACTACTGGCG CTTCGGGGAT TACATCGGTA TTGGTGCAGG TGCACATGGA
AAAATTTCCT ATCCCAATAA GATTACCCGT CAAGTGCGAG AACGCCATCC AGAAACGTAT
ATGCAGTTGA TGGAATCTAA AGGCAATGCC TTAATTGAAT CTCGTGAAAT TGAAGCTAAA
GACCTCCCCT TTGAATTTAT GCTCAACACC TTACGTTTAA GCGATGGTGT AGATACCAAT
ACCTATAGTG AGCGGACAGG GTTACCTTTA AGCACGATTA GCAAAGGCTT GAATGAGGCC
TGCAAAAAAG GCCTCTTGGA TGAAAATCCT AGCAAACTAA AGGCTACAGA TCAGGGTTTA
CGCTATCTGA ACAACCTGCA GGAAATATTT CTCAGTTAA
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| Protein sequence | MLNPVTLSAL PPLALYIHFP WCEKKCPYCD FNSHQIKDAK SSTNGFDEPR YIKALIADLE
TELPNIWGRQ VHSVFIGGGT PSLLSPEGMD QLLSAVRARI NLEPDAEITM EANPGSVEAE
KFAAFAKSGI NRVSLGIQSF QDEQLKALGR IHNGAEAKRA VQIALDHFKS VNIDLMYGLP
NQNLDSAKTD IETALSFNTP HLSLYNLTLE PNTYFANFPP KLPNEEVIDA MFDQNVDLLS
KAGYRRYEIS AYAKKDQECK HNLNYWRFGD YIGIGAGAHG KISYPNKITR QVRERHPETY
MQLMESKGNA LIESREIEAK DLPFEFMLNT LRLSDGVDTN TYSERTGLPL STISKGLNEA
CKKGLLDENP SKLKATDQGL RYLNNLQEIF LS
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