Gene Pnuc_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1078 
Symbolgmk 
ID5051909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1082059 
End bp1082697 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID640471247 
Productguanylate kinase 
Protein accessionYP_001155858 
Protein GI145589261 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGTT CAAACTCCAC TTCCTCTTAT CAAGGCAGCA TGTTGATGAT TGTGGCTCCT 
TCGGGAGCAG GTAAATCCTC CTTGGTAAAT GCTTTACTAA AAGAAGATGC AGGCCTGAAA 
TTATCTCTTT CAACAACAAC CCGAGCGCCT AGACCAGGTG AAATGGATGG AAAAGATTAT 
CGTTTTGTTG CGCAAGATGA ATTTGCCCAA GAACGCGATC AGGGTCATTT CTTAGAATGG 
GCAGAAGTTC ATGGACATTT TTATGGCACC TCCAAGCCCT GGATTGAATC TCAAATGCAG 
TCAGGCAGCG ACGTCATTTT AGAAATTGAT TGGCAAGGTG CTCAACAGAT TCGTAAACTC 
ATTCCTTCAG TTCAATGGAT TTTTATTTTT CCTCCCTCGA TTGAGGCCCT AGAAGAGCGC 
CTGCGCAAGC GGGGGCAGGA TGATGAAGCC ACCATTCAAA GGCGGCTTGC AGCTGCCCAT 
GTGGAGTTAA CACATGCCCA CGAAGCTGAT TACATCGTAG TTAATGATTC TTTTGAGCAG 
GCTTTAGCAG ATTTAAAGCA CATTCTGGCT TCTAGTCGCC TTCGCTCAGG CCCCAGCATG 
GCCCGTAATC CAGCGCTTTT GAAGCGCCTC GGGGTCTAA
 
Protein sequence
MNGSNSTSSY QGSMLMIVAP SGAGKSSLVN ALLKEDAGLK LSLSTTTRAP RPGEMDGKDY 
RFVAQDEFAQ ERDQGHFLEW AEVHGHFYGT SKPWIESQMQ SGSDVILEID WQGAQQIRKL 
IPSVQWIFIF PPSIEALEER LRKRGQDDEA TIQRRLAAAH VELTHAHEAD YIVVNDSFEQ 
ALADLKHILA SSRLRSGPSM ARNPALLKRL GV