| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1074 |
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| Symbol | |
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| ID | 5053349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1077519 |
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| End bp | 1078700 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471242 |
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| Product | hypothetical protein |
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| Protein accession | YP_001155854 |
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| Protein GI | 145589257 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATT CTGACACCAT TTCCACTAAT TCTGAGGCAT CAATTGCTGC CTGGGGCAAG
GTGGATGACA CGCATGCAAA TGTCACGTTA AATGGTGTTG TAAATGTGTA TACGCTGGGT
GGTGTATGGA CGCAAGTGCG TGCAGCCCAG GATGCATGGC TACATTCAAG CTCTACGGTT
AATAGTGCTG CTAAATCCCT TACTTGTGAT GTCACCAAAG TCGAAACACT TGATGGTGCT
GGAATCGCTT TCATCATTGC ATTGCAAGAA GCACAAACTG TCGCCGGTGG TAATTTCGAA
TTGATAGGCT TAGCTGAGCG CTATCAGCCA CTGTTAAAAG AATTTGATCC CATCTCAAAT
TTATTTCCAG CCCCTGTAGC GAAGCCACAA AGAGGTTTTG TGACCAATAT AGGAATGGGT
ACTGCAAATT TAATAAAAGA TAGCAAAGGT TTAATTACCT TTCTAGGTCA TCTTGGCTCA
GACCTTGTGT GGTCTGTTCG AAATTTAAAG CATGTTCGCT GGGGTGACTT TGTTAATGCA
GCTGTAGAAG CTGGTATTAA TGCTTTGCCA ATTATTGGGT TGGTTGCCTT CTTAATTGGC
GTAATTCTTT CATTTCAAGC TGCTATCGGG ATGAAGCAGT TTGGCGCCGT GTCATTTGTT
GGCCCGCTAG CTGCACTCGG CATCGTACGT GAGATGGGGC CTTTGATTAC TGCTATTTTG
CTAGCCGGCC GATCATCAGC AGCATTTGCT GCTGAGATTG GAACCATGAC CGTCAATAGC
GAGGTTGATG CCTTGGTTTC GGGCGGCTTA AGTCCAATGC GATTCTTGGT GGTACCCCGT
GTTCTGGCTG GTATTTTGGT TGCCCCGATC CTAACGTTAT TTGCCGACAT CGTCAGTATC
TTTGCATCCA TGCTCACTAT GTTGATTTAT GGAATCCCTT TCATTAATTT TTATAACGGC
ATGCTCTCCG CAGTCGATGT TGAAGATGTC ACGTCGGGAT TAATTAAGGC CACCTTATTT
GGTGTAGTTG TTTCAGCGGT AGGCTGTCTG CGGGGTATGC AAACTGGAAA CGGGGCAGCA
GCAGTTGGTA TTTCTGCAAC TCGTGCCGTG GTTAGCAGCA TCGTGATGAT CGTGATTGTT
GACGGAATAT TCGCTTTCAT TTCTTATAAG ACGGGCTTCT AA
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| Protein sequence | MSNSDTISTN SEASIAAWGK VDDTHANVTL NGVVNVYTLG GVWTQVRAAQ DAWLHSSSTV
NSAAKSLTCD VTKVETLDGA GIAFIIALQE AQTVAGGNFE LIGLAERYQP LLKEFDPISN
LFPAPVAKPQ RGFVTNIGMG TANLIKDSKG LITFLGHLGS DLVWSVRNLK HVRWGDFVNA
AVEAGINALP IIGLVAFLIG VILSFQAAIG MKQFGAVSFV GPLAALGIVR EMGPLITAIL
LAGRSSAAFA AEIGTMTVNS EVDALVSGGL SPMRFLVVPR VLAGILVAPI LTLFADIVSI
FASMLTMLIY GIPFINFYNG MLSAVDVEDV TSGLIKATLF GVVVSAVGCL RGMQTGNGAA
AVGISATRAV VSSIVMIVIV DGIFAFISYK TGF
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