| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1068 |
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| Symbol | |
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| ID | 5052253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1070866 |
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| End bp | 1073364 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471236 |
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| Product | hypothetical protein |
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| Protein accession | YP_001155848 |
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| Protein GI | 145589251 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.105471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTCCT TTTTATTAGA CCTCTTTAAG GGGTTAAGGC AGGACCTTCG CTCTAAAGAG
CTATTGAGTC TATTGCTTGC CCTTGTTTTA TCGGTAAGCG CATTAAGTAG CGTAAGTTAC
TTGGCTGATC GCATGCATCG CGCATTCGAG TTTGATGCGC GCCAATTACT CGCTGCCGAT
TTATTAATTG CCTCTGATCA GCCATTGCCC CCAGAGTTTT TACAAGAGGC GATAAAGAGT
CATCTTGAGA TAGCGCAAAC CGTAGTCTTT CCCAGTATGG CTAGTAGTGG GGGTGTTAGT
AAACTCGCAT CCATAAAAGC GGTCAGCTCC TCTTATCCTC TAAGGGGTTC TTTGGAAGTT
TCTACGGGGC AAAGTTCATT ACAAAATAAC GCCATATCAA ATACAGGGCC AGCTTGTGGA
ACGGTCCTGG TTGATGCAGC CTTATTAAGT AGTTTGCATT CCAAGATTGG CGATTCAATT
CGCTTGGGCG GTCAACAGTT TGTGATCGCT GGAATCTTGA CGCGCGAATT AGATCGTGGC
GCTGGGTTTA TGAATTTCGC GCCACGTCTG ATGATGTGCA TAGATGACTT AGCCTCCACA
GATTTAATTG GGCTTGGTAG TAGAGTCACC TATCGATTCT TGGTGGCTGG CCCAGACAGC
ATCATGTCAA CATATCAACA GTGGGCAACC CGTTATATTG AATCTCAAGC CTTACATGGT
CTTCGCGTTG AAACTATTGA AAATGCGCAG CCAACGATGC GCAAAACTTT AGATAGAGCC
GAACAATTTC TCTCTTTAGT CTCTATTTTG ACGGCTATGG TTGCTGCCGT AGCAATTGCC
TTATCAGCGC GCCGCTATAT GCATAAGCAG GCAGATACAT GCGCGGCATT GAAATGCTTT
GGGGCAACTA AAGCGGTTAT TTTAAAAAGA CAAGCTCAAA CGCTACTAGC GCTTGGCGCA
GTCGCGGCAG TGATAGGTTC TGCCTTGGGA TATTTGGCGC AACTTTTCTT AACTTGGTTA
TTAGGTAATC TGATCCCCGG AAATTTACCG GCTATATCGG CTTGGCCTTT TTTTTGGAGC
ATTTTATTTA CCTGTTTCCT ATTATTGGCT TTTGCTGGGC CCCCCATTTT GAGTTTGGTG
AATGTCTCAC CCATTCGCTT AATTAGAAAA GATTTCAAGT TCAACACGCT TTCCACGCTA
TGGTTGGTAA TCTTGGGCTC TTCTTGCTGC GCGCTATTAA TTTGGGTAGC AGCGCAGGAC
CTTAAACTCA CGCTTTGGGT TCTAGGTGGA TTTGTTGGGG CTATTCTGAT CTTTTCAGCC
AGCGCTAGTT TTATTCTGTG GTTATTGAAT CGCTGGCAAA CACAGCACTT TGCAGTGCGC
TTTGCTCTGA CTGCCATGGC GCGTAGATCA GGATTTGCCA TTTTGCAAAT CACGGCCTTG
GGCATCGCTT TAATGGCTCT TTTGATGATC TTGCTATTGC GTCAAGACCT GCTCAGCTCA
TGGCAAAGCA CGATTCCACC TGATGCGCCA AATCGTTTCA TGATTAATAT TCAGAGCGAT
CAAAAAGTAG GTATTAGTGA GCAATTAGAA ACCTCAGGAG TTTCTAAGCC TAATTTTTAC
CCTATGGTGC GCGGCCGTCT AATTGAAATT AATAGTCGCG ATATTTCGCC ATCAAATTAT
TCTGATGAAA ATGCAAAACG ATTAATTGAT CGTGAATTTA ATTTGTCTTA CACAGCCCAA
TTACCTCCAG GTAATCGAAT TCTTTCAGGG GACTGGATAG AAGGGGACAA ACCCCAAATT
TCCATGGAAA GTGGAATTGC GAAAACGCTT AAGCTAAAAC TCGGTGATCA ACTGACCTTT
GAGGTTGCGG GTGAGAAAGT AAACGCACCA ATTACTTCAT TACGCAAACT GGATTGGGGT
TCCATGCGTG TGAACTTTTT CGTTATTATG CCGCCTGCAC AACTGAGTCA ATTGCCGCAA
TCCTGGATTA CCTCTTACTA CCAAAGTCCA AAGCAAGAAT CACTAGATTT TGAGTTAAGC
CAGACCTATC CTAACTTGAC GATTGTTGAC GTATCTGCAT CCCTGCAGCA GATTCAGGAA
GTGATTAATA AGCTTTCTGC TGCTTTAGGG CTACTGTTTG CATTTACGAT TCTTGCCGCA
ATTTTGGTGA TGAGCTCTGC TATTGCTGCT ACTCAAGATG ATCGCTATAA AAATGCCGCC
TTGTTGAAAG CTCTGGGGGC TTCGCGCAAA GTGTTGGCAC AGATTGCCAG AGTAGAACTG
CTGTTGATTG GCTCCTTAGC CGGATTATTA GCTGGCCTAG CTTCTGGAGT GGCCGTGTGG
GCGCTTGGCC GCTTTGTCAT GGAAATCGAG TTTCACGCTT TTGGGGAGGC GATCTTGATG
GGGGTTGGCT TTGGTGTCAC GGCATCCTTG TTGGCTGGAT ATCGTTTTCA GGGGCAAATA
CAAAAAGCAA CCGCAATCGA GTGTTTGCGA GAGGCCTAG
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| Protein sequence | MISFLLDLFK GLRQDLRSKE LLSLLLALVL SVSALSSVSY LADRMHRAFE FDARQLLAAD
LLIASDQPLP PEFLQEAIKS HLEIAQTVVF PSMASSGGVS KLASIKAVSS SYPLRGSLEV
STGQSSLQNN AISNTGPACG TVLVDAALLS SLHSKIGDSI RLGGQQFVIA GILTRELDRG
AGFMNFAPRL MMCIDDLAST DLIGLGSRVT YRFLVAGPDS IMSTYQQWAT RYIESQALHG
LRVETIENAQ PTMRKTLDRA EQFLSLVSIL TAMVAAVAIA LSARRYMHKQ ADTCAALKCF
GATKAVILKR QAQTLLALGA VAAVIGSALG YLAQLFLTWL LGNLIPGNLP AISAWPFFWS
ILFTCFLLLA FAGPPILSLV NVSPIRLIRK DFKFNTLSTL WLVILGSSCC ALLIWVAAQD
LKLTLWVLGG FVGAILIFSA SASFILWLLN RWQTQHFAVR FALTAMARRS GFAILQITAL
GIALMALLMI LLLRQDLLSS WQSTIPPDAP NRFMINIQSD QKVGISEQLE TSGVSKPNFY
PMVRGRLIEI NSRDISPSNY SDENAKRLID REFNLSYTAQ LPPGNRILSG DWIEGDKPQI
SMESGIAKTL KLKLGDQLTF EVAGEKVNAP ITSLRKLDWG SMRVNFFVIM PPAQLSQLPQ
SWITSYYQSP KQESLDFELS QTYPNLTIVD VSASLQQIQE VINKLSAALG LLFAFTILAA
ILVMSSAIAA TQDDRYKNAA LLKALGASRK VLAQIARVEL LLIGSLAGLL AGLASGVAVW
ALGRFVMEIE FHAFGEAILM GVGFGVTASL LAGYRFQGQI QKATAIECLR EA
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