Gene Pnuc_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1067 
Symbol 
ID5053337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1070312 
End bp1070848 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content45% 
IMG OID640471235 
ProductRDD domain-containing protein 
Protein accessionYP_001155847 
Protein GI145589250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.172347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCAG CAGAACTCAA TGATTTGCCA GCACCTTCGT TCTGGAGACG TGTGTCATAC 
ACCCTCTACG AGCAATTAGT CCTGCTTGGC GTCATTGCAT TAACTTTTTT AGTTCCGAAC 
TTGTTTCTTG GAATTTTGTT TGGAATTTCT CTTCCAAGCT GGCTGACGTT TCTTTATCTT 
TATGGCGTAC TGGCAATTTA CTTTGTTTGG TATTGGACTA AACCAGGCCA GACACTAGCA 
ATGCAAACTT GGCGCGTCCG GATTATTGGT GCCGGAGGAC TTAACATCAC TAAACGTCAA 
GCACTATGGC GTTACATCTA TGGTTCGCTC TGGCTTATTC CTTGTGTTCT CTTGCAATGG 
ATATTTCATT TGGAGAAGTG GCAAATCATT GAAATGCTTT TTGCGGTGGC ACTCTTTTGT 
TGGCCTTTGA GTATTTATTT AGATCGCTGC AGCCCCGCGC TCCGACAAAG CCTTCCTGAT 
CGTCTTGCAG GGTCTCGCCT TGTCGAGCTA CCCAAGAACT TAGTTAAGCT CTCGTAG
 
Protein sequence
MSPAELNDLP APSFWRRVSY TLYEQLVLLG VIALTFLVPN LFLGILFGIS LPSWLTFLYL 
YGVLAIYFVW YWTKPGQTLA MQTWRVRIIG AGGLNITKRQ ALWRYIYGSL WLIPCVLLQW 
IFHLEKWQII EMLFAVALFC WPLSIYLDRC SPALRQSLPD RLAGSRLVEL PKNLVKLS