Gene Pnuc_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1061 
Symbol 
ID5052118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1065070 
End bp1066086 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640471229 
Productketol-acid reductoisomerase 
Protein accessionYP_001155841 
Protein GI145589244 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TTTACGATAA AGACGCTGAT TTGTCCCTCA TTAAGGGCAA GAAAGTCACC 
ATCATTGGTT ATGGTTCACA AGGTCATGCG CATGCATTGA ACCTGAAAGA TTCAGGCTGT 
AACGTTACCG TTGGTTTACG TAAAGGTGGC GCTTCCTGGA GCAAAGCAGA AAATGCTGGC 
TTAACAGTTA AAGAGGTTGG CGAAGCGGTT AAAGATGCTG ACGTAGTCAT GATGTTGTTG 
CCTGATGAGC AAATCGCTGA CGTATACAAC AAAGAAGTTC ACGGCAATAT CAAGCAGGGC 
GCTGCATTGG CATTCGCTCA CGGCTTTAAT GTGCATTATG GTCAAGTTCA GCCACGCGCT 
GACTTAGACG TCATCATGAT CGCTCCAAAA GCACCTGGAC ATACTGTTCG CGGTACATAC 
TCACAGGGCG GTGGTGTTCC ACATTTGATC GCCGTTTACC AAGATAAGTC TGGATCTGCA 
CGTGATGTTG CATTGTCTTA TGCGACTGCA AACGGCGGTG GTCGTGCTGG CATTATCGAA 
ACAAACTTCC GCGAAGAAAC TGAAACTGAC TTGTTCGGTG AACAAGCAGT TCTCTGTGGT 
GGCGCTGTTG ATTTGATCAA GACAGGTTTT GAAGTGTTGG TAGAAGCTGG CTATGCCCCT 
GAGATGGCTT ACTTTGAGTG CTTGCACGAG CTTAAGTTGA TCGTTGATTT GATCTACGAA 
GGCGGTATTG CCAACATGAA TTACTCAATC TCTAACAATG CTGAATACGG TGAGTATGTC 
ACTGGCCCAC GTGTTGTAAC TGAAGATACT AAGAATGCAA TGCGTCAGTG CTTGAAGGAT 
ATTCAGACTG GTGAGTATGC TAAGAGCTTC ATCCTTGAGA ACAAGGCTGG TGCCCCAACA 
TTAATCTCAC GTCGTCGTTT GAATGCTGAG CATGAAATTG AAATCGTAGG TGCTAAGTTG 
CGCGCGATGA TGCCTTGGAT TGCTAAGAAT AAATTAGTTG ATCAAACTAA GAACTAA
 
Protein sequence
MKVFYDKDAD LSLIKGKKVT IIGYGSQGHA HALNLKDSGC NVTVGLRKGG ASWSKAENAG 
LTVKEVGEAV KDADVVMMLL PDEQIADVYN KEVHGNIKQG AALAFAHGFN VHYGQVQPRA 
DLDVIMIAPK APGHTVRGTY SQGGGVPHLI AVYQDKSGSA RDVALSYATA NGGGRAGIIE 
TNFREETETD LFGEQAVLCG GAVDLIKTGF EVLVEAGYAP EMAYFECLHE LKLIVDLIYE 
GGIANMNYSI SNNAEYGEYV TGPRVVTEDT KNAMRQCLKD IQTGEYAKSF ILENKAGAPT 
LISRRRLNAE HEIEIVGAKL RAMMPWIAKN KLVDQTKN