| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1060 |
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| Symbol | |
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| ID | 5051935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1064383 |
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| End bp | 1065030 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471228 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001155840 |
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| Protein GI | 145589243 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTATC CACACCCTAT TATTGCGAAA GAAGGATGGC CGTATTTGGC TTTAATAGGG
ATTGTGACTT TGCCGGTTCA CTATATTGGC GGCATTGCCT GGTCGTGGCC GTTGTGGATT
ATTTTCATTT TTGTTCTGCA GTTTTTCCGT GACCCACAGC GTATTCCTGC CATGGGTCGC
GACCTTGTTT TATCGCCAGC CGATGGTCGT ATTGTTGTTG TGGAAAAAAC AAACGATCCT
TATGCGGATC GTGAAGCGCT CAAAATTAGC GTTTTTATGA ATGTATTTAA TGTGCACTCT
AATCGCAGCG CTGTTAATGG CTTGGTAAAA GAGATTCAGT ACTTTCCGGG CAAATTTGTT
AATGCCGATT TAGATAAAGC TTCCACTGAA AATGAGCGCA ATGCTGTAGT GATTGATGCT
AATGGCCACA TTGTTACCCT GGTACAAGTG GCAGGTTTAA TTGCGCGCCG TATTCTTTGC
TACATTCATG TCGGTGATCG TTTAAAAGCG GGTGAGCGCT ACGGCTTTAT TCGCTTTGGA
TCACGTGTAG ACGTTTATTT ACCCCTCACT GCTGAACCAT TGGTTTCTGT TGGTGATAAA
GTATTTGCAA CCAATACAGC TTTGGCGCGT TTGCCGGGCT TAGATTGA
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| Protein sequence | MMYPHPIIAK EGWPYLALIG IVTLPVHYIG GIAWSWPLWI IFIFVLQFFR DPQRIPAMGR
DLVLSPADGR IVVVEKTNDP YADREALKIS VFMNVFNVHS NRSAVNGLVK EIQYFPGKFV
NADLDKASTE NERNAVVIDA NGHIVTLVQV AGLIARRILC YIHVGDRLKA GERYGFIRFG
SRVDVYLPLT AEPLVSVGDK VFATNTALAR LPGLD
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