Gene Pnuc_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1057 
Symbol 
ID5053564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1061098 
End bp1061691 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content41% 
IMG OID640471225 
Productputative lipoprotein 
Protein accessionYP_001155837 
Protein GI145589240 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCTT TTATCCGCCC ATTCATTGCC CTCTTTGTAT TAACGCTCTG CGTAAATCAA 
CCTGTTTTTG CTCAATTTGC AAATCCATTT GGTGCAAGTA AGACCGTGGC CCAACAAAGA 
GAGGAAGTTC TTAAAAAGAA CCAGCAAATC CTTAAACATC TGTATGCCGT TGAACCAAAA 
GCTAAGGATT TAATTGAAAA GGCAGCTGGA TATGCAACTT TTAGCAATTT TGGGATGAAG 
ATTTTGATTG CTGGCGGCGG AACCGGTACT GGCGTAGTGA TGAATAAATT TAGCTCCAAG 
CCAATTTATA TGAATATGGC CGAAGTTCAA GCAGGTTTGG GGATTGGTAT TAAATCCACC 
CAAACTATTT TTGTATTTCA GAATGAGGCC GTACTAAATA ACTTTGTAAA TTCTGGCTGG 
ACTTTTGGCG GCCAAATGAC CGCCGCAGCA AAGTACGAAA AAAATGGTGA CGCCTATCAA 
GATGCCACGA TTGTTGCAGA TGGAATATTA ATGTATCAAT TAACTGACTC AGGCCTTGCA 
GCAGAAGTCA CTGGTAAAGG TACAAAGTAT TACAAGGACA GCACCCTCAA TTAA
 
Protein sequence
MRPFIRPFIA LFVLTLCVNQ PVFAQFANPF GASKTVAQQR EEVLKKNQQI LKHLYAVEPK 
AKDLIEKAAG YATFSNFGMK ILIAGGGTGT GVVMNKFSSK PIYMNMAEVQ AGLGIGIKST 
QTIFVFQNEA VLNNFVNSGW TFGGQMTAAA KYEKNGDAYQ DATIVADGIL MYQLTDSGLA 
AEVTGKGTKY YKDSTLN