Gene Pnuc_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1043 
Symbol 
ID5052977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1047268 
End bp1047759 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content40% 
IMG OID640471210 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_001155823 
Protein GI145589226 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGA AAATTTCCCA ATTCCTCGAT AGCTTAATGC TTAAAGACAT CTTGACCGGT 
ATGTCTATCA CCGGCCGTTA TCTTTTCAAG CCAAAAATTA CTATTCAATA TCCAGAAGAG
AAGACGCCTT TGTCCAATCG TTTTCGTGGG CTACATGCAT TACGCCGTTA TGAAAATGGC
GAAGAGCGTT GTATTGGTTG TAAATTATGT GAGGCGGTAT GTCCGGCATA TGCAATTACT
ATTGAAACTG CTGAGCGTGA TGATGGTACG CGTCGCACTT CACGATACGA CATCGATCTA
ACGAAATGTA TTTTCTGCGG CTTCTGCGAA GAGGCATGTC CTGTCGATGC AATTGTTGAA
ACTAATATTT TTGAATATTT TGGCGATAAA CGCGGCGATT TGTACTTTAC AAAAGATATG
TTGTTAGCTG TTGGCGATAA GTATGAAAAA GATATTGCCG TAAACCGTGC CATTGATGCA
CCTTATCGTT AA
 
Protein sequence
MFKKISQFLD SLMLKDILTG MSITGRYLFK PKITIQYPEE KTPLSNRFRG LHALRRYENG 
EERCIGCKLC EAVCPAYAIT IETAERDDGT RRTSRYDIDL TKCIFCGFCE EACPVDAIVE
TNIFEYFGDK RGDLYFTKDM LLAVGDKYEK DIAVNRAIDA PYR