| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1026 |
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| Symbol | |
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| ID | 5053736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1027156 |
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| End bp | 1030254 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471193 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001155806 |
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| Protein GI | 145589209 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.193094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCT CCGAATTATG TATTCGGCGC CCCGTAATGA CGGTGTTGCT CTCAATAGCA
ACCGTCATTG CCGGCGCTGT AGCTTATGTC AAGATTCCTG TTGCGGCATT GCCCAGCTTT
AATACACCAG TTATTTCAGT TAGCGCTTCC TTGCCAGGTG CTTCACCTGA AAATATGGCG
GCGTCAGTTG CATTACCGCT AGAAAAAGAA TTCTCGACTA TTGACGGCAT CACAGTCATT
AGTTCAACCA ATTCTTTGGG AAGCACTAGC ATTACCCTGG AATTTAATAA TGACCGGGAT
ATTGATAAAG CTGCAGTAGA CGTACAGGCC GCTCTATTGC GCGCGCAAAA GCGTTTGCCG
ATCGAGATGA CGGTGCCCCC CTCTTATCGC AAAATTAACC CTGCTGATAC ACCGGTGCTA
GTGGTCCGGA TGAGTTCTCC TTCAATTAGT TTGTCGGACC TCAACCAATA TGCAGAAAAT
TTACTCTCAC CCAATCTATC CACTATTAGT GGTGTTGCTC AGGTATTGGT CTACGGCGCA
AAACGCTATG CAGTTCGCGT ACGGGTTCAT CCTGATGCAT TGGCCAATCG CAATCTCACG
GTTGACGACG TAGCTACAGC TATTAATAAG GCTAATTCCA ATAGCCCTGT TGGAGTTTTA
GATGGTCCTC GTCAAGCCAT CACCATTTAC GCTAACCCGC AAATGGTTCA ACCAGAAGAA
TTTGCCAATC TCATCATTAG TCAGAAAAAT GGCTTACCGA TTTACCTCAA AGATGTGGCC
GAGGTTGTCG AAAGTTACGA GGATGTTAAA ACTTTAGCAA GTTCAAACGG CGAGCGCTCT
ATTGCCATCG CTGTATTACG TCAACCAAGC GCCAACACTG TTGAAGTTGT TAACTCCGTA
AAAGAATTAC TGCCACAACT CCAAAAACAG ATGCCAGAGT CAGTAAAGCT ACAGCTTTTG
AATGATCGAT CACTGTCGAT TATTGAGGCG ATACATGACG TGAACCTGAC TTTAGCCCTC
ACCGTTCTAT TGGTGGTGTT AGTCATCTTC CTTTTTCTTA AACATGTCTC CGCAACAGTT
ATTCCCTCTA TTAGCCTGCC TATTTCTTTA ATTGGCGCTT TTTTCTTACT GTACTTCCTG
GGATATAGCC TGGATAACAT CTCCCTCTTA GGCATTACCT TGGCGGTTGG CCTAGTAGTT
GATGATGCGA TTGTGGTGCT TGAAAACATC ATGCGCTATG TTGAAGAAGG CATGGATCCG
CTTAAGGCCT CCTTAAAGGG TAGTAAAGAA GTTGGCTTTA CGATCATTTC AATTTCCATT
TCATTGGTAG CAGTCTTTAT TCCACTGTTC TTTATGGCGG GCCCAATCGG TTTACTCTTT
AGGGAATTCG CGGTCGTAGT TTCACTTTCA ATATTGGTAT CAGCAGTAGT GTCACTGACT
GTTGTTCCAA TGCTTTGCAG TCGTTTTTTG CCTAAACCAG GACAACACCC CAAAGAATAT
GCAATCAACA AAAAGTTTGA CCGCATATTT GATTGGATGC TCAAGACCTA TATTCACTAT
CTTGATCTTG CCTTAAAGAA TCGTAAAGTA GTTCTCTGGG GTGCTTTGTC TACCTTTGTT
ATCACGGTGG TGTTATTTGT AAACAGTCCT AAGGGATTTT TCCCGGAAGA GGATATTGGC
CAGATTCAAG CAACCACAGA AGCTTCGGAA GATATTTCAT TTAAGGCAAT GCTGGCCCTT
CAAGATCAAG CAGCCGCTTT AGTTAATACC GATCCCAATG TGGATAGCTC GATCTCCGTG
ATTGGAGGTG GCGCCAGCTC TGGTTACAAC ACCGGTCGGA TATTCATCAT TTTGAAGCCT
AAAAGCGATC GCCAAAAGAT GTCCAAAGTG ATGGAAGGTC TTCGCAATAA GTTTAAAGAA
ATCCCGGGCC TACAGGTTTA TATGAGGCCC GTACAAAACT TACAGCTTGG GGGTAAGAAC
AGTAAAAGTC GCTATCAATT CACATTACAA AGCGTTGGTT TTGAAGGTGT CAATGAATGG
GCAGATAAGT TAATGCAAAA GATGAAGACT GACCCCATCT TCCGCGACGT GACAAGTGAT
TCTCAATTGA AGGGATTGAA TGTCAAAATC GATATCGATC GTGAAAAAGC CGCTAGTGCT
GGCGTCAGCA TTGCTGATAT CCGCACCGCC CTGTATTCGA CTTTTGGTGA GAGACAAGTT
TCTACCATCT ACACTCCCGT CAATACTTAC TACGTTATTC TTGAGGGCGC CGAAGAAGAT
CGGCAGTACG AAACCGATCT CAATAAAGTC TTTGTTCGTG GTCGCGCAAC CGATAAGCTC
ATTCCTTTAT CGAGCGTAGC TAGCTTTGTT CGGACGGTAG GGCCTACAGC GGTTAATCAC
CAAGGCCAAA TCCCTGCGGT GACGCTTTCC TTCAATCTAG CGCCAGATGT ATTTTTAGGT
GATGCAACCA AAAAAATTGA GGCCTACACC AAAGAAATTG GTCTACCACC CTCCATCATT
ACTAGCTATG GTGGTGACGC AGCCGTATTT AAGAGCAACC AATCTGGGCA GCTAATTTTG
ATCCTTTCAG CACTAGGCGT GATTTATATT TTGCTTGGTG TACTCTATGA GAGCTACATT
CATCCGCTCA CTATTTTGGC CGGCCTACCC TCTGCGGCGA TTGGTGCGAT CTTGGCTCTG
CGTATATTTG GTTTTGAGCT AACTATTGTG GCTTCAATCG GCATCCTACT CTTAATTGGC
ATCGTCAAGA AAAATGCTAT TTTGATGATT GACTTTGCTT TAGATGCACA ACGTAACCAA
GGTATGGCAC CAGAGAAAGC CATTAGAGAA GCCTGTATCT TGCGTTTCCG CCCAATCATG
ATGACAACCG TTGCAGCGCT CATGGGCGCA CTTCCAATTG CTTTTGGCCT AGGCGCCGGC
GCTGAATTGC GCCAACCATT AGGCATTAGT GTCGCCGGCG GTTTAATCTT CTCTCAATTT
GTAACCTTGA TTATTACTCC AGTGATTTAC CTCTATCTTG ATAAATACGC TGGCAATGGT
CCTATGGATA TTCCTGAGTC CGTTCTTGAG GGTACCTAA
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| Protein sequence | MTLSELCIRR PVMTVLLSIA TVIAGAVAYV KIPVAALPSF NTPVISVSAS LPGASPENMA
ASVALPLEKE FSTIDGITVI SSTNSLGSTS ITLEFNNDRD IDKAAVDVQA ALLRAQKRLP
IEMTVPPSYR KINPADTPVL VVRMSSPSIS LSDLNQYAEN LLSPNLSTIS GVAQVLVYGA
KRYAVRVRVH PDALANRNLT VDDVATAINK ANSNSPVGVL DGPRQAITIY ANPQMVQPEE
FANLIISQKN GLPIYLKDVA EVVESYEDVK TLASSNGERS IAIAVLRQPS ANTVEVVNSV
KELLPQLQKQ MPESVKLQLL NDRSLSIIEA IHDVNLTLAL TVLLVVLVIF LFLKHVSATV
IPSISLPISL IGAFFLLYFL GYSLDNISLL GITLAVGLVV DDAIVVLENI MRYVEEGMDP
LKASLKGSKE VGFTIISISI SLVAVFIPLF FMAGPIGLLF REFAVVVSLS ILVSAVVSLT
VVPMLCSRFL PKPGQHPKEY AINKKFDRIF DWMLKTYIHY LDLALKNRKV VLWGALSTFV
ITVVLFVNSP KGFFPEEDIG QIQATTEASE DISFKAMLAL QDQAAALVNT DPNVDSSISV
IGGGASSGYN TGRIFIILKP KSDRQKMSKV MEGLRNKFKE IPGLQVYMRP VQNLQLGGKN
SKSRYQFTLQ SVGFEGVNEW ADKLMQKMKT DPIFRDVTSD SQLKGLNVKI DIDREKAASA
GVSIADIRTA LYSTFGERQV STIYTPVNTY YVILEGAEED RQYETDLNKV FVRGRATDKL
IPLSSVASFV RTVGPTAVNH QGQIPAVTLS FNLAPDVFLG DATKKIEAYT KEIGLPPSII
TSYGGDAAVF KSNQSGQLIL ILSALGVIYI LLGVLYESYI HPLTILAGLP SAAIGAILAL
RIFGFELTIV ASIGILLLIG IVKKNAILMI DFALDAQRNQ GMAPEKAIRE ACILRFRPIM
MTTVAALMGA LPIAFGLGAG AELRQPLGIS VAGGLIFSQF VTLIITPVIY LYLDKYAGNG
PMDIPESVLE GT
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