| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1018 |
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| Symbol | carB |
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| ID | 5052878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1015555 |
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| End bp | 1018818 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471185 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001155798 |
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| Protein GI | 145589201 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAGC GTAGCGACAT TAAGAGCATT TTGATTATTG GTGCTGGTCC AATTGTGATT
GGCCAAGCCT GTGAGTTTGA CTACTCTGGC GCGCAAGCAT GTAAAGCATT GCGCGATGAA
GGTTATAAAG TGATTTTGGT GAACAGCAAT CCTGCAACCA TTATGACTGA CCCAGAGATG
GCCGACGTGA CATACATCGA GCCCATTACC TGGGAAGTAG TTGAGCGCAT TATTGCCGCC
GAAAAGCCTG ATGCAATATT GCCTACGATG GGTGGACAAA CTGCATTAAA TTGTGCGCTT
GATCTACATC GCCATGGTGT TTTAGAGAAA TATGGTTGTG AGTTAATTGG CGCTTCACCA
GAGGCAATTG ATAAAGCTGA AGACCGCCAA AAGTTTAAAA ATGCCATGAC TAAGATTGGT
CTGGGCTCTG CTAAGTCGGG AATAGCGCAC TCGATGGATG AGGCGCATGA GGTCCAACAA
CACATTCAGC AAGAAACCGG TAGTTCTGGC TTTCCGGTAG TAATTCGTCC TTCTTTCACA
ATGGGTGGAT CAGGTGGCGG TATTGCTTAT AACCGTGAAG AGTTTGAAGA GATTTGCAAG
CGGGGCCTCG ATTTATCCCC TACACGCGAA CTGTTAATTG AAGAATCACT CTTAGGTTGG
AAAGAGTTTG AGATGGAAGT GGTGCGTGAT CGTAACGATA ACTGCATCAT TGTTTGCTCT
ATTGAAAACT TAGATCCAAT GGGCGTTCAT ACCGGTGATT CGATTACAGT AGCACCAGCA
CAGACCTTAA CGGATAAAGA GTATCAAATC ATGCGTAATG CATCGATTGC AGTGCTACGT
GAGATCGGCG TTGATACTGG TGGCTCTAAC GTTCAGTTCT CGATTAATCC AGTCGATGGT
CGCATGATTG TGATTGAGAT GAATCCCCGC GTATCCCGCT CATCTGCTTT GGCCTCTAAA
GCGACTGGGT TCCCAATCGC CAAAATTGCT GCAAAGCTTG CAGTGGGCTA TACGCTTGAT
GAATTGAAGA ATGACATCAC TGGTGGGGCA ACGCCTGCTT CTTTTGAGCC TTCAATAGAT
TATGTTGTTA CCAAGATTCC ACGTTTTGCT TTTGAAAAAT TCCCGCAAGC TGACTCTCGT
TTGACCACTC AAATGAAGTC TGTTGGTGAA GTGATGGCGA TAGGCCGCAC CTTCCAAGAG
TCATTCCAAA AAGCATTACG CGGTCTGGAG GTTGGTGTTG ATGGCCTAGA TGAAGTGTCT
ACCGATCTAG ATGACATCAT CCAAGAGATT AACGAACCAG GCCCTGACCG CATTTGGTAT
CTAGCAGATG CTTTCCGCAT GGGTATGGGA TTGGACGAAA TTTATAGTGA GACAAAGGTT
GATCCTTGGT TCCTCGAGCA AATCGAAGAA CTCATCACGA TTGAAACTGA ACTCAAACAA
CGCAAGATTG ATAGTCTTTC CGCTCCCGAA CTGCGCGCTG TAAAGCAAAA AGGGTTCTCT
GATCGTCGGC TTGCTAAATT ACTTGGCGTA GATGCTTCTT CAGTACGTGC AGCACGTCAT
CGCTTAAAAG TTGTGCCTGT ATACAAACGT GTTGATACCT GTGCTGCAGA ATTCTCTACT
AATACTGCTT ACATGTACTC AACATATGAA GCAGAGCACG GTGAGTGCGA GTCTCGCCCA
ACAAATAAAG ACAAGATTAT GGTTTTGGGC GGAGGTCCGA ATCGTATTGG TCAGGGTATT
GAGTTTGACT ATTGCTGCGT GCACGCTGCC CTAGCAATGC GCGATGATGG TTATGAAACC
ATTATGGTCA ACTGCAATCC AGAAACAGTT TCCACCGATT ACGACACATC TGATCGCTTG
TACTTTGAGC CGTTAACCTT AGAAGATGTT TTGGAAATCG TTGCTAAAGA AAAGCCAAAA
GGTGTAATCG TTCAGTATGG TGGTCAAACA CCTTTGAAAT TGGCCTTAGA TTTGGAGCGT
AATGGTGTTC CCATTATCGG CACATCTCCC GACATGATTG ACGCTGCAGA AGATCGCGAG
CGCTTCCAGA AGTTACTGCA AGATTTGGGC TTACGTCAGC CACCTAATCG TACTGCGCGT
ACAGAGGAAG AGGCTTTAAA ACTTGCTGAA GAGATTGGCT ATCCCTTGGT AGTGCGTCCA
TCTTATGTAT TGGGCGGACG AGCCATGGAA ATTGTCCACG ATGGACGTGA CCTTGAGCGC
TATATGCGTG AAGCTGTGAA GGTATCCCAT GATTCACCTG TTTTGCTTGA TCGCTTCCTC
AACGATGCAA TTGAGTGTGA TGTAGATTGC ATTAGCGATG GTACTAAAGT ATTTATTGGC
GGTGTGATGG AACATATCGA GCAAGCTGGT GTTCACTCTG GTGACTCTGC CTGTTCTTTG
CCACCTTATT CATTATCTGA TGCGACTGTA GAAGAAATTA AACGCCAAAC AGCAGCGATG
GCCAAAGGCC TCCATGTGAT TGGTTTGATG AATGTACAGT TCGCTATCCA GAATGTAGAT
GGTCAAGATG TCATTTATGT ATTAGAGGTC AATCCACGAG CTTCACGTAC CGTACCATTT
GTATCTAAAG CTACTGGCCT GCAGTTAGCA AAAATTGCTG CTCGTTGCAT GGTTGGTCAA
ACACTTGAAC AGCAGGGCAT TCAGGCTGAA GTAAAGCCGC CATACTTCTC AGTTAAAGAG
GCTGTATTTC CATTCAATAA GTTTCCTGGC ATCGATCCAA TTCTTGGGCC AGAAATGCGC
TCGACAGGTG AGGTCATGGG TGTTGGTAAA ACCTTTGGTG AGGCGCTATT TAAATCTCAA
TTGGGCGCAG GCATTAAATT GCCCAAGAGT GGTACCGTTC TACTCACTGT AAAAGATAGC
GACAAACCTA AGGCAGTCGA AGTGGCTAAG CTCTTGCATC AACTGGGTTT CCCAATGGTT
GCCACCAAAG GAACCGCAGC GGCGATAGAA GCAGCTGGTT TACCAGTGAA GTTGGTAAAT
AAGGTGAAGG ATGGCCGTCC TCACATTGTT GATTTTATTA AGAATGGCGA AATATCCTTG
GTATTCACAA CGGTGGATGA AACTCGTACA GCTATTGCTG ACTCAAGATC TATTCGCACC
TCAGCTCAAG CAAATGGCGT GACTTATTAC ACGACCATTA GCGCTGCTCG TGCGGTGATG
GATGGTTTGC TGGCCTCTCA AAATGGCAGC AAAGAGTCTC TCGAGGTTTA TTCCTTGCAA
AACTTACATA GGACGCTCAT TTAA
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| Protein sequence | MPKRSDIKSI LIIGAGPIVI GQACEFDYSG AQACKALRDE GYKVILVNSN PATIMTDPEM
ADVTYIEPIT WEVVERIIAA EKPDAILPTM GGQTALNCAL DLHRHGVLEK YGCELIGASP
EAIDKAEDRQ KFKNAMTKIG LGSAKSGIAH SMDEAHEVQQ HIQQETGSSG FPVVIRPSFT
MGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEFEMEVVRD RNDNCIIVCS
IENLDPMGVH TGDSITVAPA QTLTDKEYQI MRNASIAVLR EIGVDTGGSN VQFSINPVDG
RMIVIEMNPR VSRSSALASK ATGFPIAKIA AKLAVGYTLD ELKNDITGGA TPASFEPSID
YVVTKIPRFA FEKFPQADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEVS
TDLDDIIQEI NEPGPDRIWY LADAFRMGMG LDEIYSETKV DPWFLEQIEE LITIETELKQ
RKIDSLSAPE LRAVKQKGFS DRRLAKLLGV DASSVRAARH RLKVVPVYKR VDTCAAEFST
NTAYMYSTYE AEHGECESRP TNKDKIMVLG GGPNRIGQGI EFDYCCVHAA LAMRDDGYET
IMVNCNPETV STDYDTSDRL YFEPLTLEDV LEIVAKEKPK GVIVQYGGQT PLKLALDLER
NGVPIIGTSP DMIDAAEDRE RFQKLLQDLG LRQPPNRTAR TEEEALKLAE EIGYPLVVRP
SYVLGGRAME IVHDGRDLER YMREAVKVSH DSPVLLDRFL NDAIECDVDC ISDGTKVFIG
GVMEHIEQAG VHSGDSACSL PPYSLSDATV EEIKRQTAAM AKGLHVIGLM NVQFAIQNVD
GQDVIYVLEV NPRASRTVPF VSKATGLQLA KIAARCMVGQ TLEQQGIQAE VKPPYFSVKE
AVFPFNKFPG IDPILGPEMR STGEVMGVGK TFGEALFKSQ LGAGIKLPKS GTVLLTVKDS
DKPKAVEVAK LLHQLGFPMV ATKGTAAAIE AAGLPVKLVN KVKDGRPHIV DFIKNGEISL
VFTTVDETRT AIADSRSIRT SAQANGVTYY TTISAARAVM DGLLASQNGS KESLEVYSLQ
NLHRTLI
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