Gene Pnuc_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1016 
Symbol 
ID5053454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1014538 
End bp1015020 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content41% 
IMG OID640471183 
Producthypothetical protein 
Protein accessionYP_001155796 
Protein GI145589199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTA CGCAATCCCA GAGAATTTTT AACGTAATTT CTGGGCTTTG GGTCGGGAGC 
TTTTTTGCTG TTGGTTTCTT AGTTGTTCCA ATTCTGTTTT CAAGTTTGGG CGATCGTCAA 
ATTGCTGGCC TAGTAGCCGC AAATCTTTTC AAAATAACGG CCTATATAGG TGTCTGCCTT 
AGTGCCATTC TGATGGTGGC TGCTAATTTT TATGTGCGAA CAGGACTTGA TTCTTATCGG 
ATGATTCGGT GGATTCTATT AGGAATGCTG ATCTGCTCCA TAGGGGCAGC CTTTATTTTG 
ATTCCCAGGA TGAATATCTT GCGTGATCAA GCTTTGTATC TAGGCGTATC TGTCACTGAA 
ACCAACAATG CAGATTTCTT TAAAAGATTG CACGGTATTT CTAGCGCTCT TTTTCTGCTC 
CAAAGTGCGC TAGGCATAGT TTTACTATGG AGAACTACCA AAACAATAAA TACGAATATC 
TAG
 
Protein sequence
MRITQSQRIF NVISGLWVGS FFAVGFLVVP ILFSSLGDRQ IAGLVAANLF KITAYIGVCL 
SAILMVAANF YVRTGLDSYR MIRWILLGML ICSIGAAFIL IPRMNILRDQ ALYLGVSVTE 
TNNADFFKRL HGISSALFLL QSALGIVLLW RTTKTINTNI