Gene Pnuc_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1008 
Symbol 
ID5053162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1005007 
End bp1005606 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content43% 
IMG OID640471173 
Productnitroreductase 
Protein accessionYP_001155788 
Protein GI145589191 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTTGG CTTCTGATAA TTTAGATTCA CTCGGAGGCT TTGCTCATGC ACTGATCCAT 
AGTCGTCAGC ATGTTTCTCC TAAAAGACTG ATTGCACCAG GCCCCAACCT ATCTCAGAAA 
TTAGAAATTT TGAATGCGGC TGGAGCCGCC CCCGATCATG GAAAGGTAAC GCCTTGGCAC 
TTTTATGAAG TCAGCCCCGA AAGTCGTAAT TTATTAGGTG ACTTATTTGC AGACGCACTC 
ATAGCAAGAG ACCCAAGCGC AACGCCAACT CAAATTGATG AAGCAAAGCA GAAAGCTTTT 
CGAGGCCCCT TGCTTTTATT GGCAACCGCT AAGCTGAACA ATGAACTTGA CAATATTCCC 
GAGCAAGAAA AACTCATCTC CGCAGGATGT GCAATTCAAA ATATTTTACT AATGGCTAAT 
TCTTTAGGAT TTGGCTCAGG ACTATCAAGC GGTAAGGCTC TATACAGCCA AAAGATGAGG 
GAGTTATTTT TACTTAAGGA TAAAGAGGAG CCTCTGTGCT TCATCACTAT CGGCACTATC 
TCGGTTCATA AGCCCAATAA GCAAAGGCCT GATGCAAATT CTTATAGTTC AGTTTTCTAA
 
Protein sequence
MILASDNLDS LGGFAHALIH SRQHVSPKRL IAPGPNLSQK LEILNAAGAA PDHGKVTPWH 
FYEVSPESRN LLGDLFADAL IARDPSATPT QIDEAKQKAF RGPLLLLATA KLNNELDNIP 
EQEKLISAGC AIQNILLMAN SLGFGSGLSS GKALYSQKMR ELFLLKDKEE PLCFITIGTI 
SVHKPNKQRP DANSYSSVF