| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0997 |
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| Symbol | |
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| ID | 5052846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 992079 |
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| End bp | 993452 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471162 |
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| Product | ABC transporter nitrate-binding protein |
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| Protein accession | YP_001155777 |
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| Protein GI | 145589180 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT ATCGTCCTTT TGATCCAGAT AGACCTCTGT TTAGCAACCG CTGCAGCTGT
GGACAGCATG CATCTGAGTT AGATCATGCA AACTCGCTTT CAGCAATGGT GGATGCCGAG
CAGCAAAGCG CAGATTTTGT TGAGGCCAGC TTAGTTAAGG CTCTTTTTCC TCAAGAAGAT
CGTAGACGCG CATTTTTAAA GGCTGTTGGA GTTGGTGGAG CAATGAGCGC TCTCTCGGGC
TTCTTGCCAG TAGGGTCCTT GCAGGCAATG GCACAAGAAA AAGCGCCATT AGAAAAACCA
GACCTAAAAA TTGGCTTTAT CGCAATTACT TGTGCGACTC CACTCATCAT GGCTGACCCA
CTTGGTTTTT ATAAAAAACA AGGCCTGAAG GTTACGCTTA ATAAGACCGC AGGTTGGGCT
TTAATTCGTG ACAAGATGCT CAATAAAGAG CATGATGCCT CACACTTTTT ATCACCAATG
CCGATCTCAA TGTCAATGGG CTTGGGTTCT GATCCTTCTC AGATGCGTGT GGCCACAATT
CAGAACGTGA ATGGTCAGGC TATTACGTTG GCTAACAAGC ATAAAGATAA TCGTGATCCG
AAAAACTGGA AAGGCATGAA GTTTGCTGTT CCATTCGAAT ACTCAATGCA TAACTTCTTG
CTGCGTTATT ACGTTGCTCA AGCTGGCTTA GATCCAGATA AAGATATTCA GATTCGCGTT
ACACCTCCAC CAGAGATGGT TGCCAACTTA CGTGCCGGCA ATATTGATGG TTTTTTAGGG
CCTGATCCAT TTAACCAGCG CGCAGTATAT GACGAGGTCG GATTTATTCA CATTCTGACT
AAGCAGATTT GGGATGGTCA CCCTTGCTGT GCTTTTGGAA CCTCAGAAGA ATTTATCCGT
AAGAATCCAA ATACCTTTGC AGCCCTCTAT CGTGCAGTCT TAAATGCTTC GACGATGGCA
CGTGATCCTG CGAATAGACC TTTAATTGCT AAAGTAATTT CTACGCCAAA TTACCTTAAC
CAGCCAGAGA CAGTTGTAAT GCAAGTTCTC ACTGGTAAGT TTGCAGATGG TCTAGGCAAT
GTGCAAAACG TACCAGATCG CATCGACTTC AACCCAATTC CTTGGTACTC CATGGCAACT
TGGATGTTGA CTCAAATGCA GCGCTGGGGC TATGTCAAAG GCGATGTGAA TTATAAGGAC
ATCTCTGAAA AAGTATTCTT GCTTACGGAC GCTAAAAAGT ATATGGGCGA GACTGGCATT
GCAGTTCCAC CATTAGCTAA AGTGGGATAC AAAAAAGACA AGATTATGGG TAAAGAGTTT
GACCCTAGTC AACCGGCAGC CTATTTGAAA TCTTTTCAAA CTAATAAAGC ATGA
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| Protein sequence | MNSYRPFDPD RPLFSNRCSC GQHASELDHA NSLSAMVDAE QQSADFVEAS LVKALFPQED
RRRAFLKAVG VGGAMSALSG FLPVGSLQAM AQEKAPLEKP DLKIGFIAIT CATPLIMADP
LGFYKKQGLK VTLNKTAGWA LIRDKMLNKE HDASHFLSPM PISMSMGLGS DPSQMRVATI
QNVNGQAITL ANKHKDNRDP KNWKGMKFAV PFEYSMHNFL LRYYVAQAGL DPDKDIQIRV
TPPPEMVANL RAGNIDGFLG PDPFNQRAVY DEVGFIHILT KQIWDGHPCC AFGTSEEFIR
KNPNTFAALY RAVLNASTMA RDPANRPLIA KVISTPNYLN QPETVVMQVL TGKFADGLGN
VQNVPDRIDF NPIPWYSMAT WMLTQMQRWG YVKGDVNYKD ISEKVFLLTD AKKYMGETGI
AVPPLAKVGY KKDKIMGKEF DPSQPAAYLK SFQTNKA
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