| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0989 |
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| Symbol | |
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| ID | 5052480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 984078 |
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| End bp | 984860 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471154 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001155769 |
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| Protein GI | 145589172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAG GAATTTTTTG CAAAAGCACT TTAGATGGGG AAGTGGTAGA TCACTGCTTC
TCCTCTTTGC TTGGTATTGG ACAAAATGCG GATCCCAGCT ATTTAGACTG GTTGATGAAA
GCCTGGGGCT GGACCCTAGC TGTAGCAGGT TTAGGTTTAA TCATCTCTCT ATTGCTTGGT
GCTGTTATGG GCACTCTCAG AACGCTTCCT GCAGATACTC GTTTAAACCG TTTCCTGGTT
AGGCTATCTA CAACCTGGGT GGAGTTATTT CGAAATATCC CGATTTTGGT TCAGGTATTC
CTGTGGTATC ACGTCATACC TGCATTTATT CTTCCCTTAA AGGCTTTACC TTCTTATTTA
TTGGTTAGCC TTGCACTCGG ATTTTTTACT TCTGCTCGTA TTGCTGAGCA GGTAAGGGCT
GGAATTCAGT CGCTTCCATC AGGACAACGT GCCGCAGCAA CTGCATTGGG TTTAAATACT
TTTCAAAGCT ATCGTTACGT TATTTTGCCA ATGGCCTTAC GAATTGTTAT ACCCCCACTT
ACTTCTGAGA GTATGAATTT AATCAAAAAC TCTTCAGTTG CATTTGCAGT ATCCGTCCCT
GAACTGACTT TATTTGCAAT GCAAGCGCAA GAAGAAACTT CACATGGTGT TGAAATTTAC
TTAGCAGTGA CGATCTTGTA CGCTTTGTCT GCATTTGCGA TAAACCGTGC AATGGCATTG
ATTGAGAAGC GCTCACGCAT TCCTGGTTTT ATCGTCTCAA ATAACGAAGT GGCGGCGCAC
TAA
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| Protein sequence | MDLGIFCKST LDGEVVDHCF SSLLGIGQNA DPSYLDWLMK AWGWTLAVAG LGLIISLLLG
AVMGTLRTLP ADTRLNRFLV RLSTTWVELF RNIPILVQVF LWYHVIPAFI LPLKALPSYL
LVSLALGFFT SARIAEQVRA GIQSLPSGQR AAATALGLNT FQSYRYVILP MALRIVIPPL
TSESMNLIKN SSVAFAVSVP ELTLFAMQAQ EETSHGVEIY LAVTILYALS AFAINRAMAL
IEKRSRIPGF IVSNNEVAAH
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