| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0988 |
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| Symbol | |
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| ID | 5052478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 983388 |
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| End bp | 984056 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471153 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001155768 |
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| Protein GI | 145589171 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGTC TTGATCTAAG TTTTTATAAC TGGGAACTTT TTACAAGTTA TATCCTAAAG
GGTCTACTCT TTAGCGTTCA GTTGACTGTG ATTGCAACGG TAGGAGGCAT TGTTTTTGGC
ACCTTCCTTG CGTTGATGCG GCTGTCTGGA AAACCTTCTA TGGTTTATCC GGCAACAATC
TACGTCAATA CAATGCGTTC AATCCCATTG GTCATGGTGA TTCTCTGGTT CTTCCTCTTG
ATTCCAATGT TAATTGGCAG GCCAATTGGG GCAGATCTTT CGGCGACCAT TACCTTTATC
GCATTTGAAG GTGCATTCTT TTCTGAAATC GTGCGCGCTG GAATTCAGTC GGTTCCAAGA
GGTCAGGGTT ACGCTGCTGA AGCATTGGGC ATGACTTACG GACAGAACAT GCGTTTTGTT
GTATTACCCC AAGCATTCCG CAATATGATC CCCGTCTTCA TGACACAGAC CATCATTTTG
TTCCAAGACA CATCTTTGGT TTACGCCATT GGCGCATATG ACTTACTAAA AGGCTTTGAA
ATTGCCGGTA AAAATTATGG TCGCCCCATT GAGACATATA TATTGGCAGC ATTTACCTAT
TTCATTATTT GTTTCTCTCT ATCAAAAATT GTTAGAAGAG TACAAGCCAA AGTGGCGATT
ATTCGCTAA
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| Protein sequence | MLSLDLSFYN WELFTSYILK GLLFSVQLTV IATVGGIVFG TFLALMRLSG KPSMVYPATI
YVNTMRSIPL VMVILWFFLL IPMLIGRPIG ADLSATITFI AFEGAFFSEI VRAGIQSVPR
GQGYAAEALG MTYGQNMRFV VLPQAFRNMI PVFMTQTIIL FQDTSLVYAI GAYDLLKGFE
IAGKNYGRPI ETYILAAFTY FIICFSLSKI VRRVQAKVAI IR
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