Gene Pnuc_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0977 
Symbol 
ID5052246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp974925 
End bp976040 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content48% 
IMG OID640471142 
Productchorismate synthase 
Protein accessionYP_001155757 
Protein GI145589160 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAA ATACTTTAGG CCTCCTCTTT ACGGTCACTA CTTTTGGTGA GTCTCATGGT 
CCCGCTATTG GGGCTGTTGT AGATGGTTGC CCCCCGGGCA TGACCCTTAG TGAGGCCGAC 
ATTCAAGCTG ATCTTGATCG CCGTAAACCC GGTACCTCAA GACACGTTAC TCAGCGCAAG 
GAAGAGGATA AGGTAGAGAT ACTGTCCGGT GTATTTGAAG GTAAAACTAC TGGTGCACCC 
ATTGGGCTTC TCATTCGGAA TACTGATCAA CGCAGTCAGG ATTACGGCGA TATATTGCAA 
ACATTTCGCC CAGGACATGC GGATTACGCC TATCACTACA AATATGGTTT CAGAGACCCA 
CGTGGTGGAG GGCGCTCATC TGCTCGCTTA ACTGCGCCTG TTGTAGCTGC TGCTGCCATC 
GCAAAAAAAT GGCTTAAAGA GCATTATGGC ACAGAGTTTT ATGGTTATAT GGGCCAATTG 
GGCGAAATAG AGGTCCCATT TCAAGATAAA AAACACATTG CTGAAAATCC TTTCTTCGCT 
GCAAATTCAG AAATCATTCC TCAGCTTGAG GGCTATATGG ATGAATTGCG AAAAGCAGGG 
GATTCATGCG GTGCTCGGAT TGAAGTGCGC GCAAGCAACG TACCTATTGG TTTAGGCGAA 
CCTCTTTTTG ATAAGTTAGA TGCCGATATC GCTCATGCCA TGATGGGCAT CAATGCGGTA 
AAGGGAGTGG AAATCGGTGC CGGCTTTAAA TCGGTTTCTC AGCGTGGTAG CGTACACGGC 
GATGATTTGC ATCCGGATGG TTTTGCTAGC AACAATTCCG GGGGCACCCT TGGAGGCATC 
AGTAGCGGTC AAGAATTACG GGTGGCGATA GCAATTAAAC CCACCTCCAG CATCATGACT 
CCTAAGCATT CTGTCGATAT CAAAGGCCAG CCAATTACGG TACAAACCAA AGGTCGCCAT 
GATCCTTGTG TCGGTATACG AGCTACTCCA ATTGCTGAGG CAATGTTGGC TTTAGTTTTA 
ATGGATCATG CATTACGTCA TCGCGCTCAA TGCGGGGATG TTGAGTTGGC TGTTCCACCA 
ATACCTGCTT CACGTCCAGG ATCTCAGCTC GACTAA
 
Protein sequence
MSGNTLGLLF TVTTFGESHG PAIGAVVDGC PPGMTLSEAD IQADLDRRKP GTSRHVTQRK 
EEDKVEILSG VFEGKTTGAP IGLLIRNTDQ RSQDYGDILQ TFRPGHADYA YHYKYGFRDP 
RGGGRSSARL TAPVVAAAAI AKKWLKEHYG TEFYGYMGQL GEIEVPFQDK KHIAENPFFA 
ANSEIIPQLE GYMDELRKAG DSCGARIEVR ASNVPIGLGE PLFDKLDADI AHAMMGINAV 
KGVEIGAGFK SVSQRGSVHG DDLHPDGFAS NNSGGTLGGI SSGQELRVAI AIKPTSSIMT 
PKHSVDIKGQ PITVQTKGRH DPCVGIRATP IAEAMLALVL MDHALRHRAQ CGDVELAVPP 
IPASRPGSQL D