Gene Pnuc_0972 details

Gene Information

• Locus tag: Pnuc_0972
• ID: 5053506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 971616
• End bp: 972020
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640471137
• Product: methionine-R-sulfoxide reductase
• Protein accession: YP_001155752
• Protein GI: 145589155
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CAGATCAAGA ATATAAACAA TCTTTAAGCG ATATTGAGTA TCGAGTCACT 
AGAGAGGCGG CTACTGAGAG GCCTTTTTCG GGTAAATATT GGGATCATTG GGACCAGGGA 
AAATATTCGT GCGTTTGTTG CGGCACACTG CTCTTCCTAT CAAATACTAA ATTTGATGCT 
GGATGCGGGT GGCCAAGCTA TAACGCACCT GAACAAGCCG CAGCAATCAA AGAAATAAAG 
GACGCAAGTC ACGGAATGAT CAGAACTGAA GTTCGCTGCT CTCACTGCGA TGCCCACTTG 
GGCCATGTCT TCGATGACGG GCCGATGCCT ACAGGCCTTC GCTATTGTAT TAACTCAGCC 
TCCTTAAGTT TTGAGCCTGG GGATAACGCC AAATTGACTA AATAG 

 

Protein sequence

MKKTDQEYKQ SLSDIEYRVT REAATERPFS GKYWDHWDQG KYSCVCCGTL LFLSNTKFDA 
GCGWPSYNAP EQAAAIKEIK DASHGMIRTE VRCSHCDAHL GHVFDDGPMP TGLRYCINSA 
SLSFEPGDNA KLTK