Gene Pnuc_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0970 
Symbol 
ID5053362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp969582 
End bp970064 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID640471135 
Productthioesterase superfamily protein 
Protein accessionYP_001155750 
Protein GI145589153 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.523818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC AAGTTCAAAT TAATCCGCAA ACTCAACTTG CCAATCTAGG CGAGGAGTTG 
AATGTCCCTT TCTTAAAACT GCTTGGAGTT CGTTTCCTCA GTGCTGAAAT GGGTAAGGGG
GAGATTTTAT TGGCTCTTAA GCCCGAACAT ACCAACACAT GGGCGGTGGC TCATGGAGGT
GTATTGCTAA CACTAATGGA TGTTGCGATG GCGGTCGCCG CTCGATCAGG AGATCCCGGG
GATCGCAGTG TTGTTACGAT TGAGTTGAAG AATAACTTTA TGCAAGCGGC TAACGGTATT
TTGCGCGTGA AGGCTGATAC TGTTAGAAGA ACTGCAACAA TGGCTTTTTG CGAGGCAAAG
TTATACAACG ATCAAGGTGA GGTTTGCTGC ATGGCCACGG GAACTTTCCA GTTCATAAAG
CGCTTACCAA CTCGCAATGC CGATGGTGAA CGCGTCATCA ATGAAGATCA ACGTTCTAAA
TAA
 
Protein sequence
MTKQVQINPQ TQLANLGEEL NVPFLKLLGV RFLSAEMGKG EILLALKPEH TNTWAVAHGG 
VLLTLMDVAM AVAARSGDPG DRSVVTIELK NNFMQAANGI LRVKADTVRR TATMAFCEAK
LYNDQGEVCC MATGTFQFIK RLPTRNADGE RVINEDQRSK