Gene Pnuc_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0969 
Symbol 
ID5053214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp968721 
End bp969578 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID640471134 
Producthypothetical protein 
Protein accessionYP_001155749 
Protein GI145589152 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.60862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCTAA TACTTTTTGC ATGGAATTCT CATCCTGACT ACTCTTTAGT GGTGGCAGCT 
AATCGCGATG AATTTTATGA GCGCGATACC GAAGGTATTT CGTACTGGGA AGAGCACCCT 
CATGTTTTAG CTGGTAGAGA TCGCGCTGAT GTATTAGGTA GCCCTGGAAC TTGGCTTGGC 
TTTACTAAAA CAGGAAAGTT TTCTGCGCTC ACAAATGTAA GAGCGCCTAG CGAGAAGAAT 
CCAGATGCCA GAACGCGTGG AGAGCTTTCT TTACTCTACC TTACCGGCAA CCAAAGCCCT 
TCCAATTTTA TTGAGACAAA TACAAAACGG TTTTCTCAAT ACAATGGCTT CAATTTGTTA 
ATGGCAGATC TCAGCAACCC CCAAAATGCC GAAATGCATT GGGTAAGCAA CCGCATGATG 
ATGGGTCAAA ATGTCCGACC ACGCAAAATC TTTCCACCTC AACCATTAAG TCCGGGTGTC 
TATGGGTTAT CAAATGCGAT GCTCGATACC CCTTGGCCAA AAGTAAACCA TCGAATTTCT 
GCATTTGCCC AAGCGCTAGC AATGGATAGC GGTCAACTGA AAAATACAGA TCAGTATTTA 
AAATTATTGG CCGACACACA TCATGCTAGT GACAGCGAAT TACCCAATAC TGGTGTGAGC 
AAGGAATGGG AAAAGGCTCT GTCAGCAGCC TTCATTAAAA CGCCCTCTTA TGGGACTCGG 
TCCAGTACCG TCTTAAGGGT TCGCAAAGAT GGCCATTTTG AAATGGTAGA GCGTCGCTTT 
GATGCAACTG GCACTGTGGG GCATGATGTG ATCACAGGGG CGCTTAGTAC TGCCCCCGGC 
TCAAATCTTT CGGTCTAG
 
Protein sequence
MCLILFAWNS HPDYSLVVAA NRDEFYERDT EGISYWEEHP HVLAGRDRAD VLGSPGTWLG 
FTKTGKFSAL TNVRAPSEKN PDARTRGELS LLYLTGNQSP SNFIETNTKR FSQYNGFNLL 
MADLSNPQNA EMHWVSNRMM MGQNVRPRKI FPPQPLSPGV YGLSNAMLDT PWPKVNHRIS 
AFAQALAMDS GQLKNTDQYL KLLADTHHAS DSELPNTGVS KEWEKALSAA FIKTPSYGTR 
SSTVLRVRKD GHFEMVERRF DATGTVGHDV ITGALSTAPG SNLSV