Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0967 |
Symbol | |
ID | 5053087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 966599 |
End bp | 967672 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640471132 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001155747 |
Protein GI | 145589150 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.829028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAAA AAATTCAGAG AAGAACGCTA TTTAGCAAGA AAAAGTCAAA ATCTCCAAAT CTTGTGGCCT ATCTACTTGG GTTGGCAGCT TTTTTTGTAT TGATCTATGG TGCTATCTTT TTCTTGCCTG TCGTACCAGC CCAATCCAAT GTGGCAGATT TAACTGTATA TAAAGTCAAA ATCAATCCCC AATCTAGTCT TGCATCTATA GCCGGTCAAT TAAAAGAGCA GGGTATTGAG CTACCTTCAT ACACATTTCA AGTTAGTGCA AGAGCGCTAT TCGTTGGCTC CAAATTGAAA CCTGGCACTT ACTTATTTTC TACCAACGCA AGTTTAGGCA AGATATTGCT TCAAATTGCT CGGGGAGATC GCATTAAAGA AAGTGTCGCG ATTATTCCTG GAATGACAAT TTGGCAAGTG AGGGACCTGG TGAATTCACA TCCGGCACTA ATACACCAAA CCAAGAGCAT GGACTCCAAA GAATTATTGC AGGCTCTTAA TCTGAATTAC CCAGGTGATG AAGGCATCTT TCTTCCTGAT ACCTATATTT TTGATCCCGA TGATCTCGAT ATCACTATTT ATCGACGAGC TTCCCAGGCT ATGCAGAAAC AACTCTCGCA ATCATGGAGC AAAAAAGAGC CAAACTCACC CCTCAAATCG CCTTATCAAT TGCTGATACT AGCCTCAATA GTAGAAAAAG AGACGGGCCG GTCTAGTGAT AGGGGTTTAG TAGCTGCAGT CTTTATTAAT CGATTAAACA AGGGTATGCC GCTACAAACA GACCCCACCG TTATTTATGG AATTGGCCCC AAATTTGACG GCAATCTCCG CAAGGCAGAT CTTCGTAAAG ATAGTCCCTA CAATACCTAT ATGCGCAAAG GACTGCCACC AACACCAATC TCAATGCCAA GTAAGGACTC GATAGAGGCT GTCATTACCC CAGCATCAAG CAATGCTTTA TATTTTGTTG CTAAAGGTGA TGGCAGCAGT CATTTTTCCC AAAGTCTAGA TGAGCATGAG GCTGCGGTGG ATCGCTATCA ACGCAAAATG AATTCCAAAG CATCTTCAAA TTAA
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Protein sequence | MRKKIQRRTL FSKKKSKSPN LVAYLLGLAA FFVLIYGAIF FLPVVPAQSN VADLTVYKVK INPQSSLASI AGQLKEQGIE LPSYTFQVSA RALFVGSKLK PGTYLFSTNA SLGKILLQIA RGDRIKESVA IIPGMTIWQV RDLVNSHPAL IHQTKSMDSK ELLQALNLNY PGDEGIFLPD TYIFDPDDLD ITIYRRASQA MQKQLSQSWS KKEPNSPLKS PYQLLILASI VEKETGRSSD RGLVAAVFIN RLNKGMPLQT DPTVIYGIGP KFDGNLRKAD LRKDSPYNTY MRKGLPPTPI SMPSKDSIEA VITPASSNAL YFVAKGDGSS HFSQSLDEHE AAVDRYQRKM NSKASSN
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