Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0964 |
Symbol | |
ID | 5052891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 963971 |
End bp | 964762 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640471129 |
Product | TatD family hydrolase |
Protein accession | YP_001155744 |
Protein GI | 145589147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.913879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATAG ACTCCCACTG CCACCTCGAT TTCCCTGAAT TCCAAGCTCG TTTGCCGGAA GTATTGGCTA ATATGGAAAA GGCACAGGTT AGCCATGGCT TATGTGTCTC AGTAGACATT CCTGACTTTC CAAAAGTGTT GCAACTAGCG CAAGATCATC CCCATTTATA TGCATCTGTA GGCGTTCATC CAGATTATGA AGATACGCCT GAACCCAGCT TTGAATTCTT GGTGGATACA GCAAAAGCTA ACCCTAAAAT CATTGCTATA GGTGAAACTG GCTTAGATTA CTTCCGAATG GGCGATCGAA GCTATGACTC TATGGAATGG CAACGAGATC GTTTCAGGAC CCATATACGC GCTGCCATTG CCGCCAAAAA GCCTCTCATC ATTCATACAA GATCCGCATC AGAGGACACA ATCCGAATTT TGAAGGAGGA GGGCGCTCAA TCCATTGGCG GCGTGATGCA TTGCTTTACA GAAAGCCTGG ATGTGGCCAA AAAAGCAATG GATTTGGGGT TTTACATCTC TTTTTCTGGA ATAGTGACTT TTAAAAGCGC TAAAGACCTC CAAGAAACTT GCAAACAGGT TCCTTTGGAA AGAATGCTCA TTGAGACAGA TTCACCTTAT TTAGCCCCAA TTCCATACCG CGGCAAGACA AATGAACCAG CCTATGTGGC TAAAGTAGGC GAATTTATAG CCGAATTAAA GGGCGTTTCA TTGGAAGCCC TTGGAAAGCA AACATCAGAG AATTTTTTTG ATTGTTTTCA GATAGATAGA ATTGATTCAT GA
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Protein sequence | MFIDSHCHLD FPEFQARLPE VLANMEKAQV SHGLCVSVDI PDFPKVLQLA QDHPHLYASV GVHPDYEDTP EPSFEFLVDT AKANPKIIAI GETGLDYFRM GDRSYDSMEW QRDRFRTHIR AAIAAKKPLI IHTRSASEDT IRILKEEGAQ SIGGVMHCFT ESLDVAKKAM DLGFYISFSG IVTFKSAKDL QETCKQVPLE RMLIETDSPY LAPIPYRGKT NEPAYVAKVG EFIAELKGVS LEALGKQTSE NFFDCFQIDR IDS
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