Gene Pnuc_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0963 
Symbol 
ID5052818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp963264 
End bp963974 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID640471128 
Productankyrin 
Protein accessionYP_001155743 
Protein GI145589146 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGTC ACTTCTGGTT GAATCAGTCT CTATTTAGTC TATTAATGGC AATTGGATTG 
TCATGTTCTG CGCAAACAGA AGATCAAATC AATGACTTTA GTAAAGCCGC TAAGTTTGAT 
GATGTCTCAA CCGTGAAGTC CTTAATTTCT AAGGGAGTTA GTCCTAATAC CGTGGATCCC 
AAGGGCAATC CAATGCTCAA TTTAGCTATT CGGGACAAAT CGACTAAGGT AACTGAATTT 
CTCCTTAAGG ATCCGAATAT TGACGTAGAT TTATCCAATA CCTATGGTGA AACACCCCTA 
ATGATTGCTG CAATTGAAGG TGATTTGCCG GTAGTTAAAG AGTTGGTGCT ACAAAACCAT 
TCACGTGTTG ACCATATTGG CTGGACGCCG ATGCATTACG CTTGCTCAAA AGGCCAATTA 
GAGGTGGCTC AGTTTTTAGT GGCTAATGGT GCCGTAGTTG ATTCAACCAG CTTAAATGGC 
ACAACACCGT TGATGATGGC AGTGCAATCC GGCAATGAAC AGCTTATTCG CTTCTTGCTA 
GACCAAGGTG CTGATATCAG CATACGTAAC GGAATGGGTT ACAGCGCTAT TGATATTGCC 
GATATCTATG AGAAGCCTTG GATTAGTACT GGATTAAAGT CGCGTTGGCA AAAGGTCTAC 
AAACAACCAT ATCCAGGGCC TTTAAGGCCG ATCCCTGCCA AATCATCCTA A
 
Protein sequence
MRSHFWLNQS LFSLLMAIGL SCSAQTEDQI NDFSKAAKFD DVSTVKSLIS KGVSPNTVDP 
KGNPMLNLAI RDKSTKVTEF LLKDPNIDVD LSNTYGETPL MIAAIEGDLP VVKELVLQNH 
SRVDHIGWTP MHYACSKGQL EVAQFLVANG AVVDSTSLNG TTPLMMAVQS GNEQLIRFLL 
DQGADISIRN GMGYSAIDIA DIYEKPWIST GLKSRWQKVY KQPYPGPLRP IPAKSS